nsv901367
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:220,404
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2813 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 2993 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 1441 SVs from 33 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv901367 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 19,756,808 | 19,763,052 | 19,969,990 | 19,977,211 |
| nsv901367 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 20,224,967 | 20,231,211 | 20,438,149 | 20,445,370 |
| nsv901367 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000014.7 | Chr14 | 19,294,807 | 19,301,051 | 19,507,989 | 19,515,210 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1557949 | copy number gain | MS22998 | SNP array | SNP genotyping analysis | 17 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1557949 | Remapped | Perfect | NC_000014.9:g.(197 56808_19763052)_(1 9969990_19977211)d up | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,756,808 | 19,763,052 | 19,969,990 | 19,977,211 |
| nssv1557949 | Remapped | Perfect | NC_000014.8:g.(202 24967_20231211)_(2 0438149_20445370)d up | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,224,967 | 20,231,211 | 20,438,149 | 20,445,370 |
| nssv1557949 | Submitted genomic | NC_000014.7:g.(192 94807_19301051)_(1 9507989_19515210)d up | NCBI36 (hg18) | NC_000014.7 | Chr14 | 19,294,807 | 19,301,051 | 19,507,989 | 19,515,210 |