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dbVar

Database of genomic structural variation

nsv901422

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:127,074

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2381 SVs from 103 studies. See in: genome view

Remapped(Score: Perfect):19,827,351-19,954,424

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv901422	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	19,827,351	19,836,888	19,951,771	19,954,424
nsv901422	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	20,295,510	20,305,047	20,419,930	20,422,583
nsv901422	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000014.7	Chr14	19,365,350	19,374,887	19,489,770	19,492,423

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1507626	copy number gain	SP54603	SNP array	SNP genotyping analysis	9
nssv1518481	copy number gain	SP57640	SNP array	SNP genotyping analysis	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1507626	Remapped	Perfect	NC_000014.9:g.(198 27351_19836888)_(1 9951771_19954424)d up	GRCh38.p12	First Pass	NC_000014.9	Chr14	19,827,351	19,836,888	19,951,771	19,954,424
nssv1518481	Remapped	Perfect	NC_000014.9:g.(198 27351_19836888)_(1 9951771_19954424)d up	GRCh38.p12	First Pass	NC_000014.9	Chr14	19,827,351	19,836,888	19,951,771	19,954,424
nssv1507626	Remapped	Perfect	NC_000014.8:g.(202 95510_20305047)_(2 0419930_20422583)d up	GRCh37.p13	First Pass	NC_000014.8	Chr14	20,295,510	20,305,047	20,419,930	20,422,583
nssv1518481	Remapped	Perfect	NC_000014.8:g.(202 95510_20305047)_(2 0419930_20422583)d up	GRCh37.p13	First Pass	NC_000014.8	Chr14	20,295,510	20,305,047	20,419,930	20,422,583
nssv1507626	Submitted genomic		NC_000014.7:g.(193 65350_19374887)_(1 9489770_19492423)d up	NCBI36 (hg18)		NC_000014.7	Chr14	19,365,350	19,374,887	19,489,770	19,492,423
nssv1518481	Submitted genomic		NC_000014.7:g.(193 65350_19374887)_(1 9489770_19492423)d up	NCBI36 (hg18)		NC_000014.7	Chr14	19,365,350	19,374,887	19,489,770	19,492,423

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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