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dbVar

Database of genomic structural variation

nsv903143

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:99,663

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 4192 SVs from 91 studies. See in: genome view

Remapped(Score: Perfect):20,925,082-21,024,744

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv903143	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	20,925,082	20,930,714	21,018,405	21,024,744
nsv903143	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	21,130,411	21,136,043	21,223,734	21,230,073
nsv903143	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000015.8	Chr15	19,395,070	19,400,702	19,488,393	19,494,732

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1538543	copy number gain	MS13759	SNP array	SNP genotyping analysis	11
nssv1551090	copy number gain	MS18756	SNP array	SNP genotyping analysis	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1538543	Remapped	Perfect	NC_000015.10:g.(20 925082_20930714)_( 21018405_21024744) dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	20,925,082	20,930,714	21,018,405	21,024,744
nssv1551090	Remapped	Perfect	NC_000015.10:g.(20 925082_20930714)_( 21018405_21024744) dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	20,925,082	20,930,714	21,018,405	21,024,744
nssv1538543	Remapped	Perfect	NC_000015.9:g.(211 30411_21136043)_(2 1223734_21230073)d up	GRCh37.p13	First Pass	NC_000015.9	Chr15	21,130,411	21,136,043	21,223,734	21,230,073
nssv1551090	Remapped	Perfect	NC_000015.9:g.(211 30411_21136043)_(2 1223734_21230073)d up	GRCh37.p13	First Pass	NC_000015.9	Chr15	21,130,411	21,136,043	21,223,734	21,230,073
nssv1538543	Submitted genomic		NC_000015.8:g.(193 95070_19400702)_(1 9488393_19494732)d up	NCBI36 (hg18)		NC_000015.8	Chr15	19,395,070	19,400,702	19,488,393	19,494,732
nssv1551090	Submitted genomic		NC_000015.8:g.(193 95070_19400702)_(1 9488393_19494732)d up	NCBI36 (hg18)		NC_000015.8	Chr15	19,395,070	19,400,702	19,488,393	19,494,732

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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