nsv908835
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:38,716
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 214 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 214 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv908835 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 76,881,025 | 76,881,226 | 76,918,076 | 76,919,740 |
| nsv908835 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 74,877,107 | 74,877,308 | 74,914,158 | 74,915,822 |
| nsv908835 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000017.9 | Chr17 | 72,388,702 | 72,388,903 | 72,425,753 | 72,427,417 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1558155 | copy number gain | MS23142 | SNP array | SNP genotyping analysis | 10 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1558155 | Remapped | Perfect | NC_000017.11:g.(76 881025_76881226)_( 76918076_76919740) dup | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 76,881,025 | 76,881,226 | 76,918,076 | 76,919,740 |
| nssv1558155 | Remapped | Perfect | NC_000017.10:g.(74 877107_74877308)_( 74914158_74915822) dup | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 74,877,107 | 74,877,308 | 74,914,158 | 74,915,822 |
| nssv1558155 | Submitted genomic | NC_000017.9:g.(723 88702_72388903)_(7 2425753_72427417)d up | NCBI36 (hg18) | NC_000017.9 | Chr17 | 72,388,702 | 72,388,903 | 72,425,753 | 72,427,417 |