nsv909373
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:39,778
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 416 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 416 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 163 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv909373 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 10,888,932 | 10,894,976 | 10,927,141 | 10,928,709 |
| nsv909373 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 10,888,930 | 10,894,974 | 10,927,139 | 10,928,707 |
| nsv909373 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000018.8 | Chr18 | 10,878,930 | 10,884,974 | 10,917,139 | 10,918,707 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1521266 | copy number loss | SP52320 | SNP array | SNP genotyping analysis | 9 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1521266 | Remapped | Perfect | NC_000018.10:g.(10 888932_10894976)_( 10927141_10928709) del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 10,888,932 | 10,894,976 | 10,927,141 | 10,928,709 |
| nssv1521266 | Remapped | Perfect | NC_000018.9:g.(108 88930_10894974)_(1 0927139_10928707)d el | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 10,888,930 | 10,894,974 | 10,927,139 | 10,928,707 |
| nssv1521266 | Submitted genomic | NC_000018.8:g.(108 78930_10884974)_(1 0917139_10918707)d el | NCBI36 (hg18) | NC_000018.8 | Chr18 | 10,878,930 | 10,884,974 | 10,917,139 | 10,918,707 |