nsv913825
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:35,483
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 421 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 423 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 222 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv913825 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000021.9 | Chr21 | 43,047,581 | 43,049,844 | 43,076,831 | 43,083,063 |
| nsv913825 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000021.8 | Chr21 | 44,467,691 | 44,469,954 | 44,496,941 | 44,503,173 |
| nsv913825 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000021.7 | Chr21 | 43,340,760 | 43,343,023 | 43,370,010 | 43,376,242 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1580971 | copy number loss | IS35484 | SNP array | SNP genotyping analysis | 201 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1580971 | Remapped | Perfect | NC_000021.9:g.(430 47581_43049844)_(4 3076831_43083063)d el | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 43,047,581 | 43,049,844 | 43,076,831 | 43,083,063 |
| nssv1580971 | Remapped | Perfect | NC_000021.8:g.(444 67691_44469954)_(4 4496941_44503173)d el | GRCh37.p13 | First Pass | NC_000021.8 | Chr21 | 44,467,691 | 44,469,954 | 44,496,941 | 44,503,173 |
| nssv1580971 | Submitted genomic | NC_000021.7:g.(433 40760_43343023)_(4 3370010_43376242)d el | NCBI36 (hg18) | NC_000021.7 | Chr21 | 43,340,760 | 43,343,023 | 43,370,010 | 43,376,242 |