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dbVar

Database of genomic structural variation

nsv914813

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:217,597

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2162 SVs from 108 studies. See in: genome view

Remapped(Score: Perfect):25,301,030-25,518,626

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv914813	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	25,301,030	25,303,640	25,514,700	25,518,626
nsv914813	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000022.10	Chr22	25,696,997	25,699,607	25,910,667	25,914,593
nsv914813	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000022.9	Chr22	24,026,997	24,029,607	24,240,667	24,244,593

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1520975	copy number gain	SP51355	SNP array	SNP genotyping analysis	6
nssv1538922	copy number gain	MS13813	SNP array	SNP genotyping analysis	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1520975	Remapped	Perfect	NC_000022.11:g.(25 301030_25303640)_( 25514700_25518626) dup	GRCh38.p12	First Pass	NC_000022.11	Chr22	25,301,030	25,303,640	25,514,700	25,518,626
nssv1538922	Remapped	Perfect	NC_000022.11:g.(25 301030_25303640)_( 25514700_25518626) dup	GRCh38.p12	First Pass	NC_000022.11	Chr22	25,301,030	25,303,640	25,514,700	25,518,626
nssv1520975	Remapped	Perfect	NC_000022.10:g.(25 696997_25699607)_( 25910667_25914593) dup	GRCh37.p13	First Pass	NC_000022.10	Chr22	25,696,997	25,699,607	25,910,667	25,914,593
nssv1538922	Remapped	Perfect	NC_000022.10:g.(25 696997_25699607)_( 25910667_25914593) dup	GRCh37.p13	First Pass	NC_000022.10	Chr22	25,696,997	25,699,607	25,910,667	25,914,593
nssv1520975	Submitted genomic		NC_000022.9:g.(240 26997_24029607)_(2 4240667_24244593)d up	NCBI36 (hg18)		NC_000022.9	Chr22	24,026,997	24,029,607	24,240,667	24,244,593
nssv1538922	Submitted genomic		NC_000022.9:g.(240 26997_24029607)_(2 4240667_24244593)d up	NCBI36 (hg18)		NC_000022.9	Chr22	24,026,997	24,029,607	24,240,667	24,244,593

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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