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dbVar

Database of genomic structural variation

nsv914924

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:50,007

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1444 SVs from 92 studies. See in: genome view

Remapped(Score: Perfect):25,482,647-25,532,653

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv914924	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	25,482,647	25,489,221	25,529,111	25,532,653
nsv914924	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000022.10	Chr22	25,878,614	25,885,188	25,925,078	25,928,620
nsv914924	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000022.9	Chr22	24,208,614	24,215,188	24,255,078	24,258,620

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1509409	copy number gain	SP54782	SNP array	SNP genotyping analysis	108
nssv1519858	copy number gain	SP50580	SNP array	SNP genotyping analysis	13
nssv1578965	copy number gain	IS34996	SNP array	SNP genotyping analysis	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1509409	Remapped	Perfect	NC_000022.11:g.(25 482647_25489221)_( 25529111_25532653) dup	GRCh38.p12	First Pass	NC_000022.11	Chr22	25,482,647	25,489,221	25,529,111	25,532,653
nssv1519858	Remapped	Perfect	NC_000022.11:g.(25 482647_25489221)_( 25529111_25532653) dup	GRCh38.p12	First Pass	NC_000022.11	Chr22	25,482,647	25,489,221	25,529,111	25,532,653
nssv1578965	Remapped	Perfect	NC_000022.11:g.(25 482647_25489221)_( 25529111_25532653) dup	GRCh38.p12	First Pass	NC_000022.11	Chr22	25,482,647	25,489,221	25,529,111	25,532,653
nssv1509409	Remapped	Perfect	NC_000022.10:g.(25 878614_25885188)_( 25925078_25928620) dup	GRCh37.p13	First Pass	NC_000022.10	Chr22	25,878,614	25,885,188	25,925,078	25,928,620
nssv1519858	Remapped	Perfect	NC_000022.10:g.(25 878614_25885188)_( 25925078_25928620) dup	GRCh37.p13	First Pass	NC_000022.10	Chr22	25,878,614	25,885,188	25,925,078	25,928,620
nssv1578965	Remapped	Perfect	NC_000022.10:g.(25 878614_25885188)_( 25925078_25928620) dup	GRCh37.p13	First Pass	NC_000022.10	Chr22	25,878,614	25,885,188	25,925,078	25,928,620
nssv1509409	Submitted genomic		NC_000022.9:g.(242 08614_24215188)_(2 4255078_24258620)d up	NCBI36 (hg18)		NC_000022.9	Chr22	24,208,614	24,215,188	24,255,078	24,258,620
nssv1519858	Submitted genomic		NC_000022.9:g.(242 08614_24215188)_(2 4255078_24258620)d up	NCBI36 (hg18)		NC_000022.9	Chr22	24,208,614	24,215,188	24,255,078	24,258,620
nssv1578965	Submitted genomic		NC_000022.9:g.(242 08614_24215188)_(2 4255078_24258620)d up	NCBI36 (hg18)		NC_000022.9	Chr22	24,208,614	24,215,188	24,255,078	24,258,620

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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