nsv914935
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:59,166
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1458 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 1458 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 621 SVs from 30 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv914935 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 25,490,694 | 25,491,546 | 25,547,395 | 25,549,859 |
| nsv914935 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 25,886,661 | 25,887,513 | 25,943,362 | 25,945,826 |
| nsv914935 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 24,216,661 | 24,217,513 | 24,273,362 | 24,275,826 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1596184 | copy number gain | IS40429 | SNP array | SNP genotyping analysis | 17 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1596184 | Remapped | Perfect | NC_000022.11:g.(25 490694_25491546)_( 25547395_25549859) dup | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 25,490,694 | 25,491,546 | 25,547,395 | 25,549,859 |
| nssv1596184 | Remapped | Perfect | NC_000022.10:g.(25 886661_25887513)_( 25943362_25945826) dup | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 25,886,661 | 25,887,513 | 25,943,362 | 25,945,826 |
| nssv1596184 | Submitted genomic | NC_000022.9:g.(242 16661_24217513)_(2 4273362_24275826)d up | NCBI36 (hg18) | NC_000022.9 | Chr22 | 24,216,661 | 24,217,513 | 24,273,362 | 24,275,826 |