nsv914986
- Organism: Homo sapiens
- Study:nstd71 (Xu et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:104,072
- Publication(s):Xu et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 485 SVs from 60 studies. See in: genome view
Overlapping variant regions from other studies: 485 SVs from 60 studies. See in: genome view
Overlapping variant regions from other studies: 137 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv914986 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 33,467,232 | 33,467,690 | 33,570,979 | 33,571,303 |
| nsv914986 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 33,863,218 | 33,863,676 | 33,966,965 | 33,967,289 |
| nsv914986 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 32,193,218 | 32,193,676 | 32,296,965 | 32,297,289 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1554667 | copy number gain | MS20878 | SNP array | SNP genotyping analysis | 14 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1554667 | Remapped | Perfect | NC_000022.11:g.(33 467232_33467690)_( 33570979_33571303) dup | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 33,467,232 | 33,467,690 | 33,570,979 | 33,571,303 |
| nssv1554667 | Remapped | Perfect | NC_000022.10:g.(33 863218_33863676)_( 33966965_33967289) dup | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 33,863,218 | 33,863,676 | 33,966,965 | 33,967,289 |
| nssv1554667 | Submitted genomic | NC_000022.9:g.(321 93218_32193676)_(3 2296965_32297289)d up | NCBI36 (hg18) | NC_000022.9 | Chr22 | 32,193,218 | 32,193,676 | 32,296,965 | 32,297,289 |