nsv917380
- Organism: Homo sapiens
- Study:nstd75 (ClinGen Prenatal)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:178,290
- Publication(s):Wapner et al. 2012
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 701 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 701 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 227 SVs from 11 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv917380 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 7,155,237 | 7,333,526 |
nsv917380 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 7,073,278 | 7,251,567 |
nsv917380 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 7,083,278 | 7,261,567 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Copy number |
---|---|---|---|---|---|---|---|---|
nssv1606533 | copy number gain | ISCA_ID_pn_2152 | Oligo aCGH | Probe signal intensity | Increased nuchal translucency | Benign | Submitter | 2 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv1606533 | Remapped | Perfect | NC_000023.11:g.(?_ 7155237)_(7333526_ ?)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 7,155,237 | 7,333,526 |
nssv1606533 | Remapped | Perfect | NC_000023.10:g.(?_ 7073278)_(7251567_ ?)dup | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 7,073,278 | 7,251,567 |
nssv1606533 | Submitted genomic | NC_000023.9:g.(?_7 083278)_(7261567_? )dup | NCBI36 (hg18) | NC_000023.9 | ChrX | 7,083,278 | 7,261,567 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | Sample ID | HGVS | Type | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Gender | Age | Copy number |
---|---|---|---|---|---|---|---|---|---|
nssv1606533 | ISCA_ID_pn_2152 | NCBI36: NC_000023.9:g.(?_7083278)_(7261567_?)dup | copy number gain | Increased nuchal translucency | Benign | Submitter | Male | 12 weeks gestation | 2 |