nsv930456
- Organism: Homo sapiens
- Study:nstd76 (Watson et al. 2013)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:865
- Publication(s):Watson et al. 2013
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2078 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 1623 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 1798 SVs from 76 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv930456 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 106,017,494 | 106,018,358 |
| nsv930456 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | 485,263 | 486,127 |
| nsv930456 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 106,483,362 | 106,484,225 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1607651 | insertion | Sequencing | Sequence alignment |
| nssv1607652 | insertion | Sequencing | Sequence alignment |
| nssv1607650 | insertion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1607651 | Remapped | Good | NT_187600.1:g.(485 263_?)_(?_486127)i ns9500 | GRCh38.p12 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | 485,263 | 486,127 |
| nssv1607652 | Remapped | Good | NT_187600.1:g.(485 263_?)_(?_486127)i ns9500 | GRCh38.p12 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | 485,263 | 486,127 |
| nssv1607650 | Remapped | Good | NT_187600.1:g.(485 274_?)_(?_486127)i ns? | GRCh38.p12 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | 485,274 | 486,127 |
| nssv1607651 | Remapped | Good | NC_000014.9:g.(106 017494_?)_(?_10601 8358)ins9500 | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,017,494 | 106,018,358 |
| nssv1607652 | Remapped | Good | NC_000014.9:g.(106 017494_?)_(?_10601 8358)ins9500 | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,017,494 | 106,018,358 |
| nssv1607650 | Remapped | Good | NC_000014.9:g.(106 017505_?)_(?_10601 8358)ins? | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,017,505 | 106,018,358 |
| nssv1607651 | Submitted genomic | NC_000014.8:g.(106 483362_?)_(?_10648 4225)ins9500 | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,483,362 | 106,484,225 | ||
| nssv1607652 | Submitted genomic | NC_000014.8:g.(106 483362_?)_(?_10648 4225)ins9500 | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,483,362 | 106,484,225 | ||
| nssv1607650 | Submitted genomic | NC_000014.8:g.(106 483373_?)_(?_10648 4225)ins(0_?) | GRCh37 (hg19) | NC_000014.8 | Chr14 | 106,483,373 | 106,484,225 |