nsv932763
- Organism: Homo sapiens
- Study:nstd79 (Dittwald et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:7,883,836
- Publication(s):Dittwald et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 20032 SVs from 129 studies. See in: genome view
Overlapping variant regions from other studies: 20107 SVs from 130 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv932763 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 79,630,804 | 79,630,804 | 87,514,639 | 87,514,639 |
| nsv932763 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 81,390,560 | 82,018,441 | 88,751,888 | 89,274,396 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1612213 | deletion | 2115 | Oligo aCGH | Probe signal intensity | |
| nssv1610697 | deletion | 261 | Oligo aCGH | Probe signal intensity | |
| nssv1612347 | deletion | 1174 | Oligo aCGH | Probe signal intensity | |
| nssv1612760 | duplication | 633 | Oligo aCGH | Probe signal intensity | nssv1611498 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1612213 | Remapped | Perfect | NC_000010.11:g.(79 491545_79491545)_( 87435786_87435786) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 79,491,545 | 79,491,545 | 87,435,786 | 87,435,786 |
| nssv1610697 | Remapped | Good | NC_000010.11:g.(79 491545_79491545)_( 87503855_87503855) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 79,491,545 | 79,491,545 | 87,503,855 | 87,503,855 |
| nssv1612347 | Remapped | Good | NC_000010.11:g.(79 491545_79491545)_( 87513171_87513171) del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 79,491,545 | 79,491,545 | 87,513,171 | 87,513,171 |
| nssv1612760 | Remapped | Good | NC_000010.11:g.(79 491545_79491545)_( 87513171_87513171) dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 79,491,545 | 79,491,545 | 87,513,171 | 87,513,171 |
| nssv1610697 | Remapped | Good | NC_000010.10:g.(81 251301_81251301)_( 89263612_89263612) del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 81,251,301 | 81,251,301 | 89,263,612 | 89,263,612 |
| nssv1612347 | Remapped | Good | NC_000010.10:g.(81 251301_81251301)_( 89272928_89272928) del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 81,251,301 | 81,251,301 | 89,272,928 | 89,272,928 |
| nssv1612760 | Remapped | Good | NC_000010.10:g.(81 251301_81251301)_( 89272928_89272928) dup | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 81,251,301 | 81,251,301 | 89,272,928 | 89,272,928 |
| nssv1612213 | Submitted genomic | NC_000010.10:g.(81 251301_81680038)_( 88853927_89195543) del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 81,251,301 | 81,680,038 | 88,853,927 | 89,195,543 | ||
| nssv1610697 | Submitted genomic | NC_000010.9:g.(809 21307_81810948)_(8 8504866_89253592)d el | NCBI36 (hg18) | NC_000010.9 | Chr10 | 80,921,307 | 81,810,948 | 88,504,866 | 89,253,592 | ||
| nssv1612347 | Submitted genomic | NC_000010.9:g.(809 21307_81670016)_(8 8843908_89262908)d el | NCBI36 (hg18) | NC_000010.9 | Chr10 | 80,921,307 | 81,670,016 | 88,843,908 | 89,262,908 | ||
| nssv1612760 | Submitted genomic | NC_000010.9:g.(809 21307_81657531)_(8 8936867_89262908)d up | NCBI36 (hg18) | NC_000010.9 | Chr10 | 80,921,307 | 81,657,531 | 88,936,867 | 89,262,908 |