Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv932803

Organism: Homo sapiens

Study:nstd79 (Dittwald et al. 2013)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:9,009,828

Publication(s):Dittwald et al. 2013

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 26633 SVs from 145 studies. See in: genome view

Remapped(Score: Perfect):21,342,541-30,352,368

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv932803	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	21,342,541	22,614,880	28,327,648	30,352,368
nsv932803	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	21,353,862	22,626,201	28,338,969	30,363,689

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis
nssv1611231	deletion	1521	Oligo aCGH	Probe signal intensity
nssv1611428	duplication	429	Oligo aCGH	Probe signal intensity
nssv1610864	deletion	1723	Oligo aCGH	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1611231	Remapped	Perfect	NC_000016.10:g.(21 317275_22006578)_( 29022104_29030728) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	21,317,275	22,006,578	29,022,104	29,030,728
nssv1611428	Remapped	Perfect	NC_000016.10:g.(21 317275_21518368)_( 29116321_29227270) dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	21,317,275	21,518,368	29,116,321	29,227,270
nssv1610864	Remapped	Perfect	NC_000016.10:g.(21 317275_21717046)_( 30186020_30352368) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	21,317,275	21,717,046	30,186,020	30,352,368
nssv1611231	Remapped	Perfect	NC_000016.9:g.(213 28596_22017899)_(2 9033425_29042049)d el	GRCh37.p13	First Pass	NC_000016.9	Chr16	21,328,596	22,017,899	29,033,425	29,042,049
nssv1611428	Remapped	Perfect	NC_000016.9:g.(213 28596_21529689)_(2 9127642_29238591)d up	GRCh37.p13	First Pass	NC_000016.9	Chr16	21,328,596	21,529,689	29,127,642	29,238,591
nssv1610864	Submitted genomic		NC_000016.9:g.(213 28596_21728367)_(3 0197341_30363689)d el	GRCh37 (hg19)		NC_000016.9	Chr16	21,328,596	21,728,367	30,197,341	30,363,689
nssv1611231	Submitted genomic		NC_000016.8:g.(212 36097_21925400)_(2 8940926_28949550)d el	NCBI36 (hg18)		NC_000016.8	Chr16	21,236,097	21,925,400	28,940,926	28,949,550
nssv1611428	Submitted genomic		NC_000016.8:g.(212 36097_21437190)_(2 9035143_29146092)d up	NCBI36 (hg18)		NC_000016.8	Chr16	21,236,097	21,437,190	29,035,143	29,146,092

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI