nsv932811
- Organism: Homo sapiens
- Study:nstd79 (Dittwald et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:14
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,299,263
- Publication(s):Dittwald et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 8171 SVs from 122 studies. See in: genome view
Overlapping variant regions from other studies: 8040 SVs from 122 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv932811 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 45,406,080 | 45,712,634 | 46,082,634 | 46,705,342 |
| nsv932811 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 43,483,446 | 43,790,000 | 44,160,000 | 44,782,708 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1612598 | deletion | 2126 | Oligo aCGH | Probe signal intensity | |
| nssv1611336 | deletion | 2051 | Oligo aCGH | Probe signal intensity | |
| nssv1611538 | deletion | 1805 | Oligo aCGH | Probe signal intensity | |
| nssv1612513 | deletion | 1847 | Oligo aCGH | Probe signal intensity | |
| nssv1610946 | deletion | 1461 | Oligo aCGH | Probe signal intensity | nssv1611708 |
| nssv1611372 | deletion | 1060 | Oligo aCGH | Probe signal intensity | |
| nssv1611973 | deletion | 1478 | Oligo aCGH | Probe signal intensity | |
| nssv1610903 | deletion | 100 | Oligo aCGH | Probe signal intensity | |
| nssv1610979 | deletion | 245 | Oligo aCGH | Probe signal intensity | |
| nssv1611079 | deletion | 145 | Oligo aCGH | Probe signal intensity | |
| nssv1611069 | deletion | 535 | Oligo aCGH | Probe signal intensity | |
| nssv1611789 | deletion | 626 | Oligo aCGH | Probe signal intensity | |
| nssv1611403 | deletion | 148 | Oligo aCGH | Probe signal intensity | |
| nssv1612775 | deletion | 457 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1612598 | Remapped | Good | NT_187663.1:g.(?_1 05219)_(822179_822 179)del | GRCh38.p12 | Second Pass | NT_187663.1 | Chr17|NT_1 87663.1 | - | 105,219 | 822,179 | 822,179 |
| nssv1611336 | Remapped | Perfect | NC_000017.11:g.(45 380330_45720310)_( 46061206_46764278) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,720,310 | 46,061,206 | 46,764,278 |
| nssv1611538 | Remapped | Perfect | NC_000017.11:g.(45 380330_45720310)_( 46061206_46764278) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,720,310 | 46,061,206 | 46,764,278 |
| nssv1612513 | Remapped | Perfect | NC_000017.11:g.(45 380330_45720310)_( 46061206_46764278) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,720,310 | 46,061,206 | 46,764,278 |
| nssv1612598 | Remapped | Perfect | NC_000017.11:g.(45 380330_45720310)_( 46082883_46120082) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,720,310 | 46,082,883 | 46,120,082 |
| nssv1610946 | Remapped | Good | NC_000017.11:g.(45 380330_45380330)_( 46764277_46764277) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,380,330 | 46,764,277 | 46,764,277 |
| nssv1611372 | Remapped | Good | NC_000017.11:g.(45 380330_45380330)_( 46764277_46764277) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,380,330 | 46,764,277 | 46,764,277 |
| nssv1611973 | Remapped | Good | NC_000017.11:g.(45 380330_45380330)_( 46764277_46764277) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,380,330 | 46,764,277 | 46,764,277 |
| nssv1610903 | Remapped | Good | NC_000017.11:g.(45 380330_45380330)_( 46808559_46808559) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,380,330 | 46,808,559 | 46,808,559 |
| nssv1610979 | Remapped | Good | NC_000017.11:g.(45 380330_45380330)_( 46808559_46808559) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,380,330 | 46,808,559 | 46,808,559 |
| nssv1611079 | Remapped | Good | NC_000017.11:g.(45 380330_45380330)_( 46808559_46808559) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,380,330 | 45,380,330 | 46,808,559 | 46,808,559 |
| nssv1611069 | Remapped | Good | NC_000017.11:g.(45 436061_45436061)_( 46764277_46764277) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,436,061 | 45,436,061 | 46,764,277 | 46,764,277 |
| nssv1611789 | Remapped | Good | NC_000017.11:g.(45 436061_45436061)_( 46764277_46764277) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,436,061 | 45,436,061 | 46,764,277 | 46,764,277 |
| nssv1611403 | Remapped | Good | NC_000017.11:g.(45 720354_45720354)_( 46808559_46808559) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,720,354 | 45,720,354 | 46,808,559 | 46,808,559 |
| nssv1612775 | Remapped | Good | NC_000017.11:g.(45 784530_45784530)_( 46764277_46764277) del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 45,784,530 | 45,784,530 | 46,764,277 | 46,764,277 |
| nssv1610946 | Remapped | Good | NC_000017.10:g.(43 457696_43457696)_( 44841643_44841643) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,457,696 | 43,457,696 | 44,841,643 | 44,841,643 |
| nssv1611372 | Remapped | Good | NC_000017.10:g.(43 457696_43457696)_( 44841643_44841643) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,457,696 | 43,457,696 | 44,841,643 | 44,841,643 |
| nssv1611973 | Remapped | Good | NC_000017.10:g.(43 457696_43457696)_( 44841643_44841643) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,457,696 | 43,457,696 | 44,841,643 | 44,841,643 |
| nssv1610903 | Remapped | Good | NC_000017.10:g.(43 457696_43457696)_( 44873614_?)del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,457,696 | 43,457,696 | 44,873,614 | - |
| nssv1610979 | Remapped | Good | NC_000017.10:g.(43 457696_43457696)_( 44873614_?)del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,457,696 | 43,457,696 | 44,873,614 | - |
| nssv1611079 | Remapped | Good | NC_000017.10:g.(43 457696_43457696)_( 44873614_?)del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,457,696 | 43,457,696 | 44,873,614 | - |
| nssv1611069 | Remapped | Good | NC_000017.10:g.(43 513427_43513427)_( 44841643_44841643) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,513,427 | 43,513,427 | 44,841,643 | 44,841,643 |
| nssv1611789 | Remapped | Good | NC_000017.10:g.(43 513427_43513427)_( 44841643_44841643) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,513,427 | 43,513,427 | 44,841,643 | 44,841,643 |
| nssv1611403 | Remapped | Good | NC_000017.10:g.(43 797720_43797720)_( 44873614_?)del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,797,720 | 43,797,720 | 44,873,614 | - |
| nssv1612775 | Remapped | Good | NC_000017.10:g.(43 861896_43861896)_( 44841643_44841643) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 43,861,896 | 43,861,896 | 44,841,643 | 44,841,643 |
| nssv1611336 | Submitted genomic | NC_000017.10:g.(43 457696_43797676)_( 44138572_44841644) del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 43,457,696 | 43,797,676 | 44,138,572 | 44,841,644 | ||
| nssv1611538 | Submitted genomic | NC_000017.10:g.(43 457696_43797676)_( 44138572_44841644) del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 43,457,696 | 43,797,676 | 44,138,572 | 44,841,644 | ||
| nssv1612513 | Submitted genomic | NC_000017.10:g.(43 457696_43797676)_( 44138572_44841644) del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 43,457,696 | 43,797,676 | 44,138,572 | 44,841,644 | ||
| nssv1612598 | Submitted genomic | NC_000017.10:g.(43 457696_43797676)_( 44160249_44197448) del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 43,457,696 | 43,797,676 | 44,160,249 | 44,197,448 | ||
| nssv1610903 | Submitted genomic | NC_000017.9:g.(408 13479_41153459)_(4 1494390_42241089)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,813,479 | 41,153,459 | 41,494,390 | 42,241,089 | ||
| nssv1610946 | Submitted genomic | NC_000017.9:g.(408 13479_41153459)_(4 1494390_42196812)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,813,479 | 41,153,459 | 41,494,390 | 42,196,812 | ||
| nssv1610979 | Submitted genomic | NC_000017.9:g.(408 13479_41153459)_(4 1494390_42241089)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,813,479 | 41,153,459 | 41,494,390 | 42,241,089 | ||
| nssv1611079 | Submitted genomic | NC_000017.9:g.(408 13479_41153459)_(4 1494390_42241089)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,813,479 | 41,153,459 | 41,494,390 | 42,241,089 | ||
| nssv1611372 | Submitted genomic | NC_000017.9:g.(408 13479_41153459)_(4 1494390_42196812)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,813,479 | 41,153,459 | 41,494,390 | 42,196,812 | ||
| nssv1611973 | Submitted genomic | NC_000017.9:g.(408 13479_41153459)_(4 1494390_42196812)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,813,479 | 41,153,459 | 41,494,390 | 42,196,812 | ||
| nssv1611069 | Submitted genomic | NC_000017.9:g.(408 69210_41153459)_(4 1494390_42196812)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,869,210 | 41,153,459 | 41,494,390 | 42,196,812 | ||
| nssv1611789 | Submitted genomic | NC_000017.9:g.(408 69210_41153459)_(4 1494390_42196812)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 40,869,210 | 41,153,459 | 41,494,390 | 42,196,812 | ||
| nssv1611403 | Submitted genomic | NC_000017.9:g.(411 53503_41167990)_(4 1494390_42241089)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 41,153,503 | 41,167,990 | 41,494,390 | 42,241,089 | ||
| nssv1612775 | Submitted genomic | NC_000017.9:g.(412 17659_41217981)_(4 1494390_42196812)d el | NCBI36 (hg18) | NC_000017.9 | Chr17 | 41,217,659 | 41,217,981 | 41,494,390 | 42,196,812 |