nsv932988
- Organism: Homo sapiens
- Study:nstd80 (Boone et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:256,496
- Publication(s):Boone et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1410 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 1411 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 433 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv932988 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 31,699,436 | 31,955,931 |
| nsv932988 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 31,717,553 | 31,974,048 |
| nsv932988 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 31,627,474 | 31,883,969 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv1613424 | deletion | 928 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1613424 | Remapped | Perfect | NC_000023.11:g.(31 679884_31699436)_( 31955931_31968066) del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 31,679,884 | 31,699,436 | 31,955,931 | 31,968,066 |
| nssv1613424 | Remapped | Perfect | NC_000023.10:g.(31 698001_31717553)_( 31974048_31986183) del | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 31,698,001 | 31,717,553 | 31,974,048 | 31,986,183 |
| nssv1613424 | Submitted genomic | NC_000023.9:g.(316 07922_31627474)_(3 1883969_31896104)d el | NCBI36 (hg18) | NC_000023.9 | ChrX | 31,607,922 | 31,627,474 | 31,883,969 | 31,896,104 |