nsv933403
- Organism: Homo sapiens
- Study:nstd80 (Boone et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:485,199
- Publication(s):Boone et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2813 SVs from 108 studies. See in: genome view
Overlapping variant regions from other studies: 2813 SVs from 108 studies. See in: genome view
Overlapping variant regions from other studies: 857 SVs from 32 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv933403 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 161,716,115 | 162,201,313 |
| nsv933403 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 162,137,147 | 162,622,345 |
| nsv933403 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 162,057,137 | 162,542,335 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv1613363 | deletion | 1922 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1613363 | Remapped | Perfect | NC_000006.12:g.(16 1628699_161716115) _(162201313_162262 425)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 161,628,699 | 161,716,115 | 162,201,313 | 162,262,425 |
| nssv1613363 | Remapped | Perfect | NC_000006.11:g.(16 2049731_162137147) _(162622345_162683 457)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 162,049,731 | 162,137,147 | 162,622,345 | 162,683,457 |
| nssv1613363 | Submitted genomic | NC_000006.10:g.(16 1969721_162057137) _(162542335_162603 447)del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 161,969,721 | 162,057,137 | 162,542,335 | 162,603,447 |