nsv933519
- Organism: Homo sapiens
- Study:nstd80 (Boone et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:412,975
- Publication(s):Boone et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2521 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 2521 SVs from 104 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv933519 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 161,788,158 | 162,201,132 |
| nsv933519 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 162,209,190 | 162,622,164 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1613820 | deletion | 2491 | Oligo aCGH | Probe signal intensity | nssv1615308 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1613820 | Remapped | Perfect | NC_000006.12:g.(16 1785868_161788158) _(162201132_162201 313)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 161,785,868 | 161,788,158 | 162,201,132 | 162,201,313 |
| nssv1613820 | Submitted genomic | NC_000006.11:g.(16 2206900_162209190) _(162622164_162622 345)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 162,206,900 | 162,209,190 | 162,622,164 | 162,622,345 |