nsv933683
- Organism: Homo sapiens
- Study:nstd80 (Boone et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:151,857
- Publication(s):Boone et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1168 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 1169 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 385 SVs from 11 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv933683 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 7,235,805 | 7,387,661 |
nsv933683 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 7,153,846 | 7,305,702 |
nsv933683 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 7,163,846 | 7,315,702 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis |
---|---|---|---|---|
nssv1615831 | deletion | 2410 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv1615831 | Remapped | Perfect | NC_000023.11:g.(72 25249_7235805)_(73 87661_7711067)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 7,225,249 | 7,235,805 | 7,387,661 | 7,711,067 |
nssv1615831 | Remapped | Pass | NC_000023.10:g.(71 43290_7143290)_(76 79108_7679108)del | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 7,143,290 | 7,143,290 | 7,679,108 | 7,679,108 |
nssv1615831 | Submitted genomic | NC_000023.9:g.(715 3290_7163846)_(731 5702_7639108)del | NCBI36 (hg18) | NC_000023.9 | ChrX | 7,153,290 | 7,163,846 | 7,315,702 | 7,639,108 |