nsv933786
- Organism: Homo sapiens
- Study:nstd80 (Boone et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:151,832
- Publication(s):Boone et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 607 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 607 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 182 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv933786 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 50,401,216 | 50,553,047 |
| nsv933786 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 50,628,354 | 50,780,185 |
| nsv933786 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 50,481,858 | 50,633,689 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv1615964 | deletion | 472 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1615964 | Remapped | Perfect | NC_000002.12:g.(50 390423_50401216)_( 50553047_50564289) del | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 50,390,423 | 50,401,216 | 50,553,047 | 50,564,289 |
| nssv1615964 | Remapped | Perfect | NC_000002.11:g.(50 617561_50628354)_( 50780185_50791427) del | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 50,617,561 | 50,628,354 | 50,780,185 | 50,791,427 |
| nssv1615964 | Submitted genomic | NC_000002.10:g.(50 471065_50481858)_( 50633689_50644931) del | NCBI36 (hg18) | NC_000002.10 | Chr2 | 50,471,065 | 50,481,858 | 50,633,689 | 50,644,931 |