nsv934122
- Organism: Homo sapiens
- Study:nstd80 (Boone et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:404,008
- Publication(s):Boone et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1680 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 1681 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 484 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv934122 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 31,657,938 | 32,061,945 |
| nsv934122 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 31,676,055 | 32,080,062 |
| nsv934122 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 31,585,976 | 31,989,983 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv1614710 | deletion | 918 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1614710 | Remapped | Perfect | NC_000023.11:g.(31 657855_31657938)_( 32061945_32072237) del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 31,657,855 | 31,657,938 | 32,061,945 | 32,072,237 |
| nssv1614710 | Remapped | Perfect | NC_000023.10:g.(31 675972_31676055)_( 32080062_32090354) del | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 31,675,972 | 31,676,055 | 32,080,062 | 32,090,354 |
| nssv1614710 | Submitted genomic | NC_000023.9:g.(315 85893_31585976)_(3 1989983_32000275)d el | NCBI36 (hg18) | NC_000023.9 | ChrX | 31,585,893 | 31,585,976 | 31,989,983 | 32,000,275 |