nsv948928
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:488,675
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1762 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1762 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 87 SVs from 7 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv948928 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 6,039,494 | 6,528,168 |
| nsv948928 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 6,089,495 | 6,578,169 |
| nsv948928 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000016.8 | Chr16 | 6,029,496 | 6,518,170 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv2767519 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2767519 | Remapped | Perfect | NC_000016.10:g.(?_ 6039494)_(6528168_ ?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 6,039,494 | 6,528,168 |
| nssv2767519 | Remapped | Perfect | NC_000016.9:g.(?_6 089495)_(6578169_? )del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 6,089,495 | 6,578,169 |
| nssv2767519 | Submitted genomic | NC_000016.8:g.(?_6 029496)_(6518170_? )del | NCBI35 (hg17) | NC_000016.8 | Chr16 | 6,029,496 | 6,518,170 |