nsv949032
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:343,021
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1090 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 1091 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 39 SVs from 3 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv949032 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 96,596,132 | 96,939,152 |
nsv949032 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 96,467,132 | 96,810,152 |
nsv949032 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000011.8 | Chr11 | 95,972,342 | 96,315,362 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv2767752 | copy number loss | SNP array | SNP genotyping analysis | 1 |
nssv2768258 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv2767752 | Remapped | Perfect | NC_000011.10:g.(?_ 96596132)_(9693915 2_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 96,596,132 | 96,939,152 |
nssv2768258 | Remapped | Perfect | NC_000011.10:g.(?_ 96596132)_(9693915 2_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 96,596,132 | 96,939,152 |
nssv2767752 | Remapped | Perfect | NC_000011.9:g.(?_9 6467132)_(96810152 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 96,467,132 | 96,810,152 |
nssv2768258 | Remapped | Perfect | NC_000011.9:g.(?_9 6467132)_(96810152 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 96,467,132 | 96,810,152 |
nssv2767752 | Submitted genomic | NC_000011.8:g.(?_9 5972342)_(96315362 _?)del | NCBI35 (hg17) | NC_000011.8 | Chr11 | 95,972,342 | 96,315,362 | ||
nssv2768258 | Submitted genomic | NC_000011.8:g.(?_9 5972342)_(96315362 _?)del | NCBI35 (hg17) | NC_000011.8 | Chr11 | 95,972,342 | 96,315,362 |