nsv949060
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:325,959
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 813 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 813 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 12 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv949060 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 45,987,990 | 46,313,948 |
| nsv949060 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 46,280,188 | 46,606,146 |
| nsv949060 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000015.8 | Chr15 | 44,067,480 | 44,393,438 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv2767677 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2767677 | Remapped | Perfect | NC_000015.10:g.(?_ 45987990)_(4631394 8_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 45,987,990 | 46,313,948 |
| nssv2767677 | Remapped | Perfect | NC_000015.9:g.(?_4 6280188)_(46606146 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 46,280,188 | 46,606,146 |
| nssv2767677 | Submitted genomic | NC_000015.8:g.(?_4 4067480)_(44393438 _?)del | NCBI35 (hg17) | NC_000015.8 | Chr15 | 44,067,480 | 44,393,438 |