nsv949309
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:249,454
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 856 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 856 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 31 SVs from 6 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv949309 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 15,947,084 | 16,196,537 |
| nsv949309 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 15,986,709 | 16,236,162 |
| nsv949309 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 15,759,949 | 16,009,402 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv2767971 | copy number gain | SNP array | SNP genotyping analysis | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2767971 | Remapped | Perfect | NC_000007.14:g.(?_ 15947084)_(1619653 7_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 15,947,084 | 16,196,537 |
| nssv2767971 | Remapped | Perfect | NC_000007.13:g.(?_ 15986709)_(1623616 2_?)dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 15,986,709 | 16,236,162 |
| nssv2767971 | Submitted genomic | NC_000007.11:g.(?_ 15759949)_(1600940 2_?)dup | NCBI35 (hg17) | NC_000007.11 | Chr7 | 15,759,949 | 16,009,402 |