nsv949339
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:207,991
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1456 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1456 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 44 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv949339 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 161,867,506 | 162,075,496 |
| nsv949339 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 162,288,538 | 162,496,528 |
| nsv949339 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000006.9 | Chr6 | 162,258,949 | 162,466,939 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv2768008 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2768008 | Remapped | Perfect | NC_000006.12:g.(?_ 161867506)_(162075 496_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 161,867,506 | 162,075,496 |
| nssv2768008 | Remapped | Perfect | NC_000006.11:g.(?_ 162288538)_(162496 528_?)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 162,288,538 | 162,496,528 |
| nssv2768008 | Submitted genomic | NC_000006.9:g.(?_1 62258949)_(1624669 39_?)del | NCBI35 (hg17) | NC_000006.9 | Chr6 | 162,258,949 | 162,466,939 |