nsv949596
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:204,879
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 489 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 489 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 24 SVs from 4 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv949596 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 152,964,383 | 153,169,261 |
nsv949596 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 152,343,943 | 152,548,821 |
nsv949596 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000005.8 | Chr5 | 152,324,136 | 152,529,014 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv2768327 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv2768327 | Remapped | Perfect | NC_000005.10:g.(?_ 152964383)_(153169 261_?)del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 152,964,383 | 153,169,261 |
nssv2768327 | Remapped | Perfect | NC_000005.9:g.(?_1 52343943)_(1525488 21_?)del | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 152,343,943 | 152,548,821 |
nssv2768327 | Submitted genomic | NC_000005.8:g.(?_1 52324136)_(1525290 14_?)del | NCBI35 (hg17) | NC_000005.8 | Chr5 | 152,324,136 | 152,529,014 |