nsv949671
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:178,076
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 555 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 561 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 23 SVs from 6 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv949671 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 215,769,398 | 215,947,473 |
nsv949671 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 215,942,740 | 216,120,815 |
nsv949671 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000001.8 | Chr1 | 212,331,135 | 212,509,210 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Copy number |
---|---|---|---|---|
nssv2767282 | copy number loss | SNP array | SNP genotyping analysis | 1 |
nssv2768036 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv2767282 | Remapped | Perfect | NC_000001.11:g.(?_ 215769398)_(215947 473_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 215,769,398 | 215,947,473 |
nssv2768036 | Remapped | Perfect | NC_000001.11:g.(?_ 215769398)_(215947 473_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 215,769,398 | 215,947,473 |
nssv2767282 | Remapped | Perfect | NC_000001.10:g.(?_ 215942740)_(216120 815_?)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 215,942,740 | 216,120,815 |
nssv2768036 | Remapped | Perfect | NC_000001.10:g.(?_ 215942740)_(216120 815_?)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 215,942,740 | 216,120,815 |
nssv2767282 | Submitted genomic | NC_000001.8:g.(?_2 12331135)_(2125092 10_?)del | NCBI35 (hg17) | NC_000001.8 | Chr1 | 212,331,135 | 212,509,210 | ||
nssv2768036 | Submitted genomic | NC_000001.8:g.(?_2 12331135)_(2125092 10_?)del | NCBI35 (hg17) | NC_000001.8 | Chr1 | 212,331,135 | 212,509,210 |