nsv949692
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:390,665
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1294 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 1299 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 74 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv949692 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 53,742,782 | 54,133,446 |
| nsv949692 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 55,502,542 | 55,893,206 |
| nsv949692 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000010.8 | Chr10 | 55,172,548 | 55,563,212 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv2768428 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2768428 | Remapped | Perfect | NC_000010.11:g.(?_ 53742782)_(5413344 6_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 53,742,782 | 54,133,446 |
| nssv2768428 | Remapped | Perfect | NC_000010.10:g.(?_ 55502542)_(5589320 6_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 55,502,542 | 55,893,206 |
| nssv2768428 | Submitted genomic | NC_000010.8:g.(?_5 5172548)_(55563212 _?)del | NCBI35 (hg17) | NC_000010.8 | Chr10 | 55,172,548 | 55,563,212 |