nsv952623
- Organism: Homo sapiens
- Study:nstd73 (Dogan et al. 2014)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:105,100
- Publication(s):Dogan et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 424 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 424 SVs from 52 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv952623 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 50,050,704 | 50,155,803 |
nsv952623 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 50,342,901 | 50,448,000 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv2999090 | duplication | SAMN01096093 | Sequencing | Read depth | 9,109 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv2999090 | Remapped | Perfect | NC_000015.10:g.(50 050704_?)_(?_50155 803)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 50,050,704 | 50,155,803 |
nssv2999090 | Submitted genomic | NC_000015.9:g.(503 42901_?)_(?_504480 00)dup | GRCh37 (hg19) | NC_000015.9 | Chr15 | 50,342,901 | 50,448,000 |