nsv953994
- Organism: Homo sapiens
- Study:nstd73 (Dogan et al. 2014)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:68,400
- Publication(s):Dogan et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 802 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 802 SVs from 65 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv953994 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 5,992,941 | 6,061,340 |
nsv953994 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 6,053,001 | 6,121,400 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv3001623 | deletion | SAMN01096093 | Sequencing | Read depth | 9,109 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv3001623 | Remapped | Perfect | NC_000001.11:g.(59 92941_?)_(?_606134 0)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 5,992,941 | 6,061,340 |
nssv3001623 | Submitted genomic | NC_000001.10:g.(60 53001_?)_(?_612140 0)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 6,053,001 | 6,121,400 |