nsv958874
- Organism: Homo sapiens
- Study:nstd83 (Morak et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:97,526
- Publication(s):Morak et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 422 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 429 SVs from 52 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv958874 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 36,929,046 | 37,026,571 |
nsv958874 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 36,929,043 | 37,026,568 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|---|---|
nssv3020578 | deletion | 9 | Sequencing | Sequence alignment | Childhood B Acute Lymphoblastic Leukemia | Uncertain significance | Submitter | nssv3020567, nssv3020568, nssv3020580 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv3020578 | Remapped | Perfect | NC_000009.12:g.369 29046_37026571del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 36,929,046 | 37,026,571 |
nssv3020578 | Submitted genomic | NC_000009.11:g.369 29043_37026568del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 36,929,043 | 37,026,568 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | Sample ID | HGVS | Type | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Gender | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|---|---|
nssv3020578 | 9 | GRCh37: NC_000009.11:g.36929043_37026568del | deletion | Childhood B Acute Lymphoblastic Leukemia | Uncertain significance | Submitter | Male | nssv3020567, nssv3020568, nssv3020580 |