nsv959364
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:100,107
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 629 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 629 SVs from 78 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv959364 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 85,485,719 | 85,585,825 |
| nsv959364 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 86,028,950 | 86,129,056 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3020942 | duplication | Sequencing | Read depth |
| nssv3021504 | duplication | Sequencing | Read depth |
| nssv3021614 | duplication | Sequencing | Read depth |
| nssv3021712 | duplication | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3020942 | Remapped | Perfect | NC_000015.10:g.(85 137905_85485719)_( 85585825_85639372) dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 85,137,905 | 85,485,719 | 85,585,825 | 85,639,372 |
| nssv3021504 | Remapped | Perfect | NC_000015.10:g.(85 137905_85485719)_( 85585825_85639372) dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 85,137,905 | 85,485,719 | 85,585,825 | 85,639,372 |
| nssv3021614 | Remapped | Perfect | NC_000015.10:g.(85 137905_85485719)_( 85585825_85639372) dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 85,137,905 | 85,485,719 | 85,585,825 | 85,639,372 |
| nssv3021712 | Remapped | Perfect | NC_000015.10:g.(85 137905_85485719)_( 85585825_85639372) dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 85,137,905 | 85,485,719 | 85,585,825 | 85,639,372 |
| nssv3020942 | Submitted genomic | NC_000015.9:g.(856 81136_86028950)_(8 6129056_86182603)d up | GRCh37 (hg19) | NC_000015.9 | Chr15 | 85,681,136 | 86,028,950 | 86,129,056 | 86,182,603 | ||
| nssv3021504 | Submitted genomic | NC_000015.9:g.(856 81136_86028950)_(8 6129056_86182603)d up | GRCh37 (hg19) | NC_000015.9 | Chr15 | 85,681,136 | 86,028,950 | 86,129,056 | 86,182,603 | ||
| nssv3021614 | Submitted genomic | NC_000015.9:g.(856 81136_86028950)_(8 6129056_86182603)d up | GRCh37 (hg19) | NC_000015.9 | Chr15 | 85,681,136 | 86,028,950 | 86,129,056 | 86,182,603 | ||
| nssv3021712 | Submitted genomic | NC_000015.9:g.(856 81136_86028950)_(8 6129056_86182603)d up | GRCh37 (hg19) | NC_000015.9 | Chr15 | 85,681,136 | 86,028,950 | 86,129,056 | 86,182,603 |