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dbVar

Database of genomic structural variation

nsv959366

Organism: Homo sapiens

Study:nstd86 (Poultney et al. 2013)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:24,606

Publication(s):Poultney et al. 2013

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 860 SVs from 84 studies. See in: genome view

Remapped(Score: Perfect):16,924,323-16,948,928

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv959366	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	16,924,323	16,948,928
nsv959366	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	17,250,818	17,275,423

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv3020722	deletion	Sequencing	Read depth
nssv3021047	duplication	Sequencing	Read depth
nssv3021412	duplication	Sequencing	Read depth
nssv3021717	duplication	Sequencing	Read depth

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv3020722	Remapped	Perfect	NC_000001.11:g.(16 585698_16585698)_( 16950951_16950951) del	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,585,698	16,585,698	16,950,951	16,950,951
nssv3021047	Remapped	Perfect	NC_000001.11:g.(16 585698_16585698)_( 16950951_16950951) dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,585,698	16,585,698	16,950,951	16,950,951
nssv3021412	Remapped	Perfect	NC_000001.11:g.(16 585698_16585698)_( 16950951_16950951) dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,585,698	16,585,698	16,950,951	16,950,951
nssv3021717	Remapped	Perfect	NC_000001.11:g.(16 930349_16930427)_( 16948928_16950951) dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,930,349	16,930,427	16,948,928	16,950,951
nssv3020722	Submitted genomic		NC_000001.10:g.(16 912193_17250818)_( 17275423_17277446) del	GRCh37 (hg19)		NC_000001.10	Chr1	16,912,193	17,250,818	17,275,423	17,277,446
nssv3021047	Submitted genomic		NC_000001.10:g.(16 912193_17250818)_( 17275423_17277446) dup	GRCh37 (hg19)		NC_000001.10	Chr1	16,912,193	17,250,818	17,275,423	17,277,446
nssv3021412	Submitted genomic		NC_000001.10:g.(16 912193_17250818)_( 17275423_17277446) dup	GRCh37 (hg19)		NC_000001.10	Chr1	16,912,193	17,250,818	17,275,423	17,277,446
nssv3021717	Submitted genomic		NC_000001.10:g.(17 256844_17256922)_( 17275423_17277446) dup	GRCh37 (hg19)		NC_000001.10	Chr1	17,256,844	17,256,922	17,275,423	17,277,446

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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