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dbVar

Database of genomic structural variation

nsv959503

Organism: Homo sapiens

Study:nstd86 (Poultney et al. 2013)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:54,171

Publication(s):Poultney et al. 2013

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 647 SVs from 75 studies. See in: genome view

Remapped(Score: Perfect):16,110,083-16,164,253

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv959503	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	16,110,083	16,164,253
nsv959503	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	15,967,592	16,021,762

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv3020962	deletion	Sequencing	Read depth
nssv3020719	deletion	Sequencing	Read depth
nssv3021037	deletion	Sequencing	Read depth
nssv3021317	deletion	Sequencing	Read depth
nssv3021749	deletion	Sequencing	Read depth
nssv3021958	deletion	Sequencing	Read depth

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv3020962	Remapped	Perfect	NC_000008.11:g.(15 764220_16110083)_( 16141047_16143556) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,764,220	16,110,083	16,141,047	16,143,556
nssv3020719	Remapped	Perfect	NC_000008.11:g.(15 764220_16110083)_( 16164253_16168456) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,764,220	16,110,083	16,164,253	16,168,456
nssv3021037	Remapped	Perfect	NC_000008.11:g.(15 764220_16110083)_( 16164253_16168456) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,764,220	16,110,083	16,164,253	16,168,456
nssv3021317	Remapped	Perfect	NC_000008.11:g.(15 764220_16110083)_( 16164253_16168456) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,764,220	16,110,083	16,164,253	16,168,456
nssv3021749	Remapped	Perfect	NC_000008.11:g.(15 764220_16110083)_( 16164253_16168456) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,764,220	16,110,083	16,164,253	16,168,456
nssv3021958	Remapped	Perfect	NC_000008.11:g.(15 764220_16110083)_( 16164253_16168456) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,764,220	16,110,083	16,164,253	16,168,456
nssv3020962	Submitted genomic		NC_000008.10:g.(15 621729_15967592)_( 15998556_16001065) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,621,729	15,967,592	15,998,556	16,001,065
nssv3020719	Submitted genomic		NC_000008.10:g.(15 621729_15967592)_( 16021762_16025965) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,621,729	15,967,592	16,021,762	16,025,965
nssv3021037	Submitted genomic		NC_000008.10:g.(15 621729_15967592)_( 16021762_16025965) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,621,729	15,967,592	16,021,762	16,025,965
nssv3021317	Submitted genomic		NC_000008.10:g.(15 621729_15967592)_( 16021762_16025965) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,621,729	15,967,592	16,021,762	16,025,965
nssv3021749	Submitted genomic		NC_000008.10:g.(15 621729_15967592)_( 16021762_16025965) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,621,729	15,967,592	16,021,762	16,025,965
nssv3021958	Submitted genomic		NC_000008.10:g.(15 621729_15967592)_( 16021762_16025965) del	GRCh37 (hg19)		NC_000008.10	Chr8	15,621,729	15,967,592	16,021,762	16,025,965

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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