nsv959777
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:132,611
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 443 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 443 SVs from 49 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv959777 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 42,315,721 | 42,448,331 |
| nsv959777 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 40,944,361 | 41,076,971 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3020623 | deletion | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3020623 | Remapped | Perfect | NC_000020.11:g.(42 282527_42315721)_( 42448331_42472264) del | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 42,282,527 | 42,315,721 | 42,448,331 | 42,472,264 |
| nssv3020623 | Submitted genomic | NC_000020.10:g.(40 911167_40944361)_( 41076971_41100904) del | GRCh37 (hg19) | NC_000020.10 | Chr20 | 40,911,167 | 40,944,361 | 41,076,971 | 41,100,904 |