nsv959860
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:11,480
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 184 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 182 SVs from 34 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv959860 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 107,039,759 | 107,051,238 |
nsv959860 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 107,360,963 | 107,372,442 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv3020706 | deletion | Sequencing | Read depth |
nssv3021797 | duplication | Sequencing | Read depth |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv3020706 | Remapped | Pass | NC_000006.12:g.(10 6666004_106666004) _(107068702_107068 702)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 106,666,004 | 106,666,004 | 107,068,702 | 107,068,702 |
nssv3021797 | Remapped | Pass | NC_000006.12:g.(10 6666004_106666004) _(107068702_107068 702)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 106,666,004 | 106,666,004 | 107,068,702 | 107,068,702 |
nssv3020706 | Submitted genomic | NC_000006.11:g.(10 7113879_107360963) _(107372442_107389 906)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 107,113,879 | 107,360,963 | 107,372,442 | 107,389,906 | ||
nssv3021797 | Submitted genomic | NC_000006.11:g.(10 7113879_107360963) _(107372442_107389 906)dup | GRCh37 (hg19) | NC_000006.11 | Chr6 | 107,113,879 | 107,360,963 | 107,372,442 | 107,389,906 |