nsv959878
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:161,246
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 698 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 698 SVs from 74 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv959878 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 161,759,409 | 161,920,654 |
| nsv959878 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 162,680,561 | 162,841,806 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3021899 | deletion | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3021899 | Remapped | Perfect | NC_000004.12:g.(16 1656496_161759409) _(161920654_162111 269)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 161,656,496 | 161,759,409 | 161,920,654 | 162,111,269 |
| nssv3021899 | Submitted genomic | NC_000004.11:g.(16 2577648_162680561) _(162841806_163032 421)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 162,577,648 | 162,680,561 | 162,841,806 | 163,032,421 |