nsv974712
- Organism: Homo sapiens
- Study:nstd82 (Sudmant et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:62,937
- Publication(s):Sudmant et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 253 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 253 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 62 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv974712 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 62,549,229 | 62,612,165 |
| nsv974712 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 62,841,428 | 62,904,364 |
| nsv974712 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 60,628,720 | 60,691,656 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv2757451 | deletion | HGDP01307 | Sequencing | Read depth | 1 | 17,161 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2757451 | Remapped | Perfect | NC_000015.10:g.(?_ 62549229)_(6261216 5_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 62,549,229 | 62,612,165 |
| nssv2757451 | Remapped | Perfect | NC_000015.9:g.(?_6 2841428)_(62904364 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 62,841,428 | 62,904,364 |
| nssv2757451 | Submitted genomic | NC_000015.8:g.(?_6 0628720)_(60691656 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 60,628,720 | 60,691,656 |