nsv983743
- Organism: Homo sapiens
- Study:nstd82 (Sudmant et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:23,273
- Publication(s):Sudmant et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 714 SVs from 81 studies. See in: genome view
Overlapping variant regions from other studies: 714 SVs from 81 studies. See in: genome view
Overlapping variant regions from other studies: 339 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv983743 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 68,672,172 | 68,695,444 |
| nsv983743 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000013.10 | Chr13 | 69,246,304 | 69,269,576 |
| nsv983743 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000013.9 | Chr13 | 68,144,305 | 68,167,577 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv2757922 | deletion | HGDP00998 | Sequencing | Read depth | 0 | 17,267 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2757922 | Remapped | Perfect | NC_000013.11:g.(?_ 68672172)_(6869544 4_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 68,672,172 | 68,695,444 |
| nssv2757922 | Remapped | Perfect | NC_000013.10:g.(?_ 69246304)_(6926957 6_?)del | GRCh37.p13 | First Pass | NC_000013.10 | Chr13 | 69,246,304 | 69,269,576 |
| nssv2757922 | Submitted genomic | NC_000013.9:g.(?_6 8144305)_(68167577 _?)del | NCBI36 (hg18) | NC_000013.9 | Chr13 | 68,144,305 | 68,167,577 |