nsv993248
- Organism: Homo sapiens
- Study:nstd94 (Helman et al. 2014)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:32
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Helman et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 114 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 114 SVs from 32 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv993248 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nsv993248 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv3348593 | mobile element insertion | TCGA-22-1016 | Sequencing | Split read and paired-end mapping | 218 |
| nssv3348594 | mobile element insertion | TCGA-34-2600 | Sequencing | Split read and paired-end mapping | 959 |
| nssv3348595 | mobile element insertion | TCGA-BA-5153 | Sequencing | Split read and paired-end mapping | 812 |
| nssv3348596 | mobile element insertion | TCGA-CR-6480 | Sequencing | Split read and paired-end mapping | 908 |
| nssv3348597 | mobile element insertion | TCGA-CR-6487 | Sequencing | Split read and paired-end mapping | 1,163 |
| nssv3348598 | mobile element insertion | TCGA-CR-7404 | Sequencing | Split read and paired-end mapping | 1,065 |
| nssv3348599 | mobile element insertion | TCGA-CV-6961 | Sequencing | Split read and paired-end mapping | 1,102 |
| nssv3348600 | mobile element insertion | TCGA-CN-4737 | Sequencing | Split read and paired-end mapping | 1,125 |
| nssv3348601 | mobile element insertion | TCGA-CN-5374 | Sequencing | Split read and paired-end mapping | 1,108 |
| nssv3348602 | mobile element insertion | TCGA-CV-6433 | Sequencing | Split read and paired-end mapping | 903 |
| nssv3348603 | mobile element insertion | TCGA-AP-A05A | Sequencing | Split read and paired-end mapping | 1,019 |
| nssv3348604 | mobile element insertion | TCGA-AP-A0LE | Sequencing | Split read and paired-end mapping | 971 |
| nssv3348605 | mobile element insertion | TCGA-AX-A05S | Sequencing | Split read and paired-end mapping | 1,081 |
| nssv3348606 | mobile element insertion | TCGA-AX-A1CI | Sequencing | Split read and paired-end mapping | 1,089 |
| nssv3348607 | mobile element insertion | TCGA-44-2665 | Sequencing | Split read and paired-end mapping | 683 |
| nssv3348608 | mobile element insertion | TCGA-50-6597 | Sequencing | Split read and paired-end mapping | 1,089 |
| nssv3348609 | mobile element insertion | TCGA-55-6982 | Sequencing | Split read and paired-end mapping | 1,108 |
| nssv3348610 | mobile element insertion | TCGA-55-7281 | Sequencing | Split read and paired-end mapping | 1,016 |
| nssv3348611 | mobile element insertion | TCGA-64-1680 | Sequencing | Split read and paired-end mapping | 612 |
| nssv3348612 | mobile element insertion | TCGA-06-0214 | Sequencing | Split read and paired-end mapping | 1,101 |
| nssv3348613 | mobile element insertion | TCGA-06-0686 | Sequencing | Split read and paired-end mapping | 1,228 |
| nssv3348614 | mobile element insertion | TCGA-06-5415 | Sequencing | Split read and paired-end mapping | 1,088 |
| nssv3348615 | mobile element insertion | TCGA-14-1823 | Sequencing | Split read and paired-end mapping | 1,021 |
| nssv3348616 | mobile element insertion | TCGA-19-2624 | Sequencing | Split read and paired-end mapping | 1,059 |
| nssv3348617 | mobile element insertion | TCGA-19-5960 | Sequencing | Split read and paired-end mapping | 978 |
| nssv3348618 | mobile element insertion | TCGA-A3-3370 | Sequencing | Split read and paired-end mapping | 867 |
| nssv3348619 | mobile element insertion | TCGA-A3-3387 | Sequencing | Split read and paired-end mapping | 1,198 |
| nssv3348620 | mobile element insertion | TCGA-13-0725 | Sequencing | Split read and paired-end mapping | 803 |
| nssv3348621 | mobile element insertion | TCGA-AA-A00R | Sequencing | Split read and paired-end mapping | 952 |
| nssv3348622 | mobile element insertion | TCGA-A8-A08S | Sequencing | Split read and paired-end mapping | 984 |
| nssv3348623 | mobile element insertion | TCGA-A8-A075 | Sequencing | Split read and paired-end mapping | 1,010 |
| nssv3348624 | mobile element insertion | TCGA-A8-A07B | Sequencing | Split read and paired-end mapping | 1,037 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3348593 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348594 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348595 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348596 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348597 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348598 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348599 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348600 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348601 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348602 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348603 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348604 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348605 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348606 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348607 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348608 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348609 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348610 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348611 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348612 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348613 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348614 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348615 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348616 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348617 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348618 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348619 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348620 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348621 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348622 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348623 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348624 | Remapped | Perfect | NC_000022.11:g.324 31438_32431439ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 32,431,438 | 32,431,438 |
| nssv3348593 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348594 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348595 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348596 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348597 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348598 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348599 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348600 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348601 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348602 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348603 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348604 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348605 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348606 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348607 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348608 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348609 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348610 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348611 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348612 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348613 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348614 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348615 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348616 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348617 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348618 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348619 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348620 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348621 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348622 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348623 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 | ||
| nssv3348624 | Submitted genomic | NC_000022.10:g.328 27425_32827426ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 32,827,425 | 32,827,425 |