nsv993321

Organism: Homo sapiens

Study:nstd94 (Helman et al. 2014)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:18
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Helman et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 265 SVs from 31 studies. See in: genome view

Remapped(Score: Perfect):14,980,614-14,980,614

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv993321	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nsv993321	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000021.8	Chr21	16,352,935	16,352,935

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3372455	mobile element insertion	TCGA-56-1622	Sequencing	Split read and paired-end mapping	883
nssv3372456	mobile element insertion	TCGA-CN-4741	Sequencing	Split read and paired-end mapping	1,041
nssv3372457	mobile element insertion	TCGA-CR-6480	Sequencing	Split read and paired-end mapping	908
nssv3372458	mobile element insertion	TCGA-CR-7385	Sequencing	Split read and paired-end mapping	1,150
nssv3372459	mobile element insertion	TCGA-BA-6873	Sequencing	Split read and paired-end mapping	1,110
nssv3372460	mobile element insertion	TCGA-CN-4737	Sequencing	Split read and paired-end mapping	1,125
nssv3372461	mobile element insertion	TCGA-CV-7255	Sequencing	Split read and paired-end mapping	909
nssv3372462	mobile element insertion	TCGA-EY-A1GW	Sequencing	Split read and paired-end mapping	978
nssv3372463	mobile element insertion	TCGA-44-2665	Sequencing	Split read and paired-end mapping	683
nssv3372464	mobile element insertion	TCGA-06-0214	Sequencing	Split read and paired-end mapping	1,101
nssv3372465	mobile element insertion	TCGA-19-5960	Sequencing	Split read and paired-end mapping	978
nssv3372466	mobile element insertion	TCGA-27-1831	Sequencing	Split read and paired-end mapping	1,170
nssv3372467	mobile element insertion	TCGA-AK-3428	Sequencing	Split read and paired-end mapping	1,164
nssv3372468	mobile element insertion	TCGA-13-0890	Sequencing	Split read and paired-end mapping	1,187
nssv3372469	mobile element insertion	TCGA-A2-A0EY	Sequencing	Split read and paired-end mapping	1,047
nssv3372470	mobile element insertion	TCGA-B6-A0RE	Sequencing	Split read and paired-end mapping	1,003
nssv3372471	mobile element insertion	TCGA-A2-A04P	Sequencing	Split read and paired-end mapping	1,030
nssv3372472	mobile element insertion	TCGA-A2-A0D0	Sequencing	Split read and paired-end mapping	1,020

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv3372455	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372456	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372457	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372458	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372459	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372460	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372461	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372462	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372463	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372464	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372465	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372466	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372467	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372468	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372469	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372470	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372471	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372472	Remapped	Perfect	NC_000021.9:g.1498 0614_14980615ins?	GRCh38.p12	First Pass	NC_000021.9	Chr21	14,980,614	14,980,614
nssv3372455	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372456	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372457	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372458	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372459	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372460	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372461	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372462	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372463	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372464	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372465	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372466	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372467	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372468	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372469	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372470	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372471	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935
nssv3372472	Submitted genomic		NC_000021.8:g.1635 2935_16352936ins?	GRCh37 (hg19)		NC_000021.8	Chr21	16,352,935	16,352,935

dbVar

Database of genomic structural variation

nsv993321

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant