nsv993398
- Organism: Homo sapiens
- Study:nstd94 (Helman et al. 2014)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Helman et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 176 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 176 SVs from 31 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv993398 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 43,497,770 | 43,497,770 |
| nsv993398 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 43,893,650 | 43,893,650 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv3393967 | mobile element insertion | TCGA-A2-A0D0 | Sequencing | Split read and paired-end mapping | 1,020 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3393967 | Remapped | Perfect | NC_000022.11:g.434 97770_43497771ins? | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 43,497,770 | 43,497,770 |
| nssv3393967 | Submitted genomic | NC_000022.10:g.438 93650_43893651ins? | GRCh37 (hg19) | NC_000022.10 | Chr22 | 43,893,650 | 43,893,650 |