nsv997006
- Study:nstd82 (Sudmant et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:P_pygmaeus_2.0.2 (ponAbe2)
- Variant Calls:80
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,329
- Publication(s):Sudmant et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Variant Region Placement Information
Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|
nsv997006 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Primary Assembly | Chr6_rando m | 6,101,673 | 6,104,001 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv3402892 | deletion | Homo_denisova-Denisova_30x | Sequencing | Read depth | 19,139 |
nssv3402893 | deletion | SAMN01920473 | Sequencing | Read depth | 13,799 |
nssv3402894 | deletion | SAMN01920474 | Sequencing | Read depth | 13,812 |
nssv3402895 | deletion | SAMN01920476 | Sequencing | Read depth | 13,908 |
nssv3402896 | deletion | SAMN01920492 | Sequencing | Read depth | 13,471 |
nssv3402897 | deletion | SAMN01920493 | Sequencing | Read depth | 13,471 |
nssv3402898 | deletion | SAMN01920494 | Sequencing | Read depth | 13,471 |
nssv3402899 | deletion | SAMN01920495 | Sequencing | Read depth | 13,471 |
nssv3402900 | deletion | SAMN01920496 | Sequencing | Read depth | 13,471 |
nssv3402901 | deletion | SAMN01920477 | Sequencing | Read depth | 13,641 |
nssv3402902 | deletion | SAMN01920479 | Sequencing | Read depth | 13,667 |
nssv3402903 | deletion | SAMN01920478 | Sequencing | Read depth | 13,652 |
nssv3402904 | deletion | SAMN01920480 | Sequencing | Read depth | 13,643 |
nssv3402905 | deletion | Gorilla_gorilla_gorilla-9753_Kokomo | Sequencing | Read depth | 13,644 |
nssv3402906 | deletion | SAMN01920483 | Sequencing | Read depth | 13,645 |
nssv3402907 | deletion | SAMN01920484 | Sequencing | Read depth | 13,628 |
nssv3402908 | deletion | SAMN01920485 | Sequencing | Read depth | 13,644 |
nssv3402909 | deletion | Gorilla_gorilla_gorilla-A935_Fritz | Sequencing | Read depth | 13,652 |
nssv3402910 | deletion | SAMN01920487 | Sequencing | Read depth | 13,625 |
nssv3402911 | deletion | SAMN01920489 | Sequencing | Read depth | 13,471 |
nssv3402912 | deletion | Gorilla_gorilla_gorilla-Snowflake | Sequencing | Read depth | 13,657 |
nssv3402913 | deletion | SAMN01920490 | Sequencing | Read depth | 13,471 |
nssv3402914 | deletion | SAMN01920491 | Sequencing | Read depth | 13,671 |
nssv3402915 | deletion | HGDP01307 | Sequencing | Read depth | 17,161 |
nssv3402916 | deletion | HGDP00521 | Sequencing | Read depth | 17,171 |
nssv3402917 | deletion | HGDP00778 | Sequencing | Read depth | 17,185 |
nssv3402918 | deletion | HGDP00998 | Sequencing | Read depth | 17,267 |
nssv3402919 | deletion | HGDP01284 | Sequencing | Read depth | 17,196 |
nssv3402920 | deletion | HGDP00456 | Sequencing | Read depth | 17,189 |
nssv3402921 | deletion | HGDP00542 | Sequencing | Read depth | 17,157 |
nssv3402922 | deletion | HGDP01029 | Sequencing | Read depth | 17,182 |
nssv3402923 | deletion | HGDP00665 | Sequencing | Read depth | 17,185 |
nssv3402924 | deletion | HGDP00927 | Sequencing | Read depth | 17,185 |
nssv3402925 | deletion | SAMN01920504 | Sequencing | Read depth | 14,831 |
nssv3402926 | deletion | SAMN01920506 | Sequencing | Read depth | 14,796 |
nssv3402927 | deletion | SAMN01920507 | Sequencing | Read depth | 14,643 |
nssv3402928 | deletion | SAMN01920508 | Sequencing | Read depth | 14,784 |
nssv3402929 | deletion | SAMN01920509 | Sequencing | Read depth | 14,796 |
nssv3402930 | deletion | Pan_paniscus-A920_Kidogo | Sequencing | Read depth | 14,643 |
nssv3402931 | deletion | SAMN01920510 | Sequencing | Read depth | 14,643 |
nssv3402932 | deletion | SAMN01920511 | Sequencing | Read depth | 14,796 |
nssv3402933 | deletion | SAMN01920513 | Sequencing | Read depth | 14,803 |
nssv3402934 | deletion | SAMN01920514 | Sequencing | Read depth | 14,790 |
nssv3402935 | deletion | SAMN01920515 | Sequencing | Read depth | 14,814 |
nssv3402936 | deletion | SAMN01920516 | Sequencing | Read depth | 14,643 |
nssv3402937 | deletion | Pan_paniscus-A951_Pongo | Sequencing | Read depth | 14,643 |
nssv3402938 | deletion | Pan_paniscus-X00095_Kakowet | Sequencing | Read depth | 14,858 |
nssv3402939 | deletion | SAMN01920517 | Sequencing | Read depth | 14,560 |
nssv3402940 | deletion | SAMN01920518 | Sequencing | Read depth | 14,544 |
nssv3402941 | deletion | SAMN01920519 | Sequencing | Read depth | 14,560 |
nssv3402942 | deletion | SAMN01920520 | Sequencing | Read depth | 14,560 |
nssv3402943 | deletion | SAMN01920521 | Sequencing | Read depth | 14,554 |
nssv3402944 | deletion | SAMN01920523 | Sequencing | Read depth | 14,551 |
nssv3402945 | deletion | SAMN01920524 | Sequencing | Read depth | 14,557 |
nssv3402946 | deletion | SAMN01920525 | Sequencing | Read depth | 14,553 |
nssv3402947 | deletion | SAMN01920526 | Sequencing | Read depth | 14,541 |
nssv3402948 | deletion | SAMN01920522 | Sequencing | Read depth | 14,557 |
nssv3402949 | deletion | SAMN01920527 | Sequencing | Read depth | 14,562 |
nssv3402950 | deletion | SAMN01920528 | Sequencing | Read depth | 14,776 |
nssv3402951 | deletion | SAMN01920531 | Sequencing | Read depth | 14,608 |
nssv3402952 | deletion | SAMN01920532 | Sequencing | Read depth | 14,576 |
nssv3402953 | deletion | Pan_troglodytes_schweinfurthii-Yolanda | Sequencing | Read depth | 14,664 |
nssv3402954 | deletion | SAMN01920529 | Sequencing | Read depth | 14,610 |
nssv3402955 | deletion | SAMN01920534 | Sequencing | Read depth | 14,815 |
nssv3402956 | deletion | SAMN01920536 | Sequencing | Read depth | 15,183 |
nssv3402957 | deletion | SAMN01920541 | Sequencing | Read depth | 14,615 |
nssv3402958 | deletion | Pan_troglodytes_verus-A907_Susie_A | Sequencing | Read depth | 14,602 |
nssv3402959 | deletion | SAMN01920537 | Sequencing | Read depth | 14,600 |
nssv3402960 | deletion | SAMN01920540 | Sequencing | Read depth | 14,584 |
nssv3402961 | deletion | SAMN01920539 | Sequencing | Read depth | 14,708 |
nssv3402962 | deletion | SAMN01920499 | Sequencing | Read depth | 13,641 |
nssv3402963 | deletion | SAMN01920502 | Sequencing | Read depth | 13,644 |
nssv3402964 | deletion | SAMN01920503 | Sequencing | Read depth | 13,626 |
nssv3402965 | deletion | SAMN01920497 | Sequencing | Read depth | 13,633 |
nssv3402966 | deletion | SAMN01920500 | Sequencing | Read depth | 13,643 |
nssv3402967 | deletion | SAMN01920501 | Sequencing | Read depth | 13,643 |
nssv3402968 | deletion | SAMN01920498 | Sequencing | Read depth | 13,636 |
nssv3402969 | deletion | Gorilla_gorilla_gorilla-Kwan | Sequencing | Read depth | 13,471 |
nssv3402970 | deletion | Gorilla_beringei_graueri-Mukisi | Sequencing | Read depth | 13,597 |
nssv3402971 | deletion | Gorilla_gorilla_gorilla-Kamilah | Sequencing | Read depth | 13,471 |
Variant Call Placement Information
Variant Call ID | Placement Type | Assembly | Chr | Start | Stop |
---|---|---|---|---|---|
nssv3402892 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402893 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402894 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402895 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402896 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402897 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402898 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402899 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402900 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402901 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402902 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402903 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402904 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402905 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402906 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402907 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402908 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402909 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402910 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402911 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402912 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402913 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402914 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402915 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402916 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402917 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402918 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402919 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402920 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402921 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402922 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402923 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402924 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402925 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402926 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402927 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402928 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402929 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402930 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402931 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402932 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402933 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402934 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402935 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402936 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402937 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402938 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402939 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402940 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402941 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402942 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402943 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402944 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402945 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402946 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402947 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402948 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402949 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402950 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402951 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402952 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402953 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402954 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402955 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402956 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402957 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402958 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402959 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402960 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402961 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402962 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402963 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402964 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402965 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402966 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402967 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402968 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402969 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402970 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |
nssv3402971 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr6_rando m | 6,101,673 | 6,104,001 |