nsv997012
- Study:nstd82 (Sudmant et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:P_pygmaeus_2.0.2 (ponAbe2)
- Variant Calls:80
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,048
- Publication(s):Sudmant et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Variant Region Placement Information
Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|
nsv997012 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Primary Assembly | Chr1_rando m | 19,098,492 | 19,113,539 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv3436801 | deletion | Homo_denisova-Denisova_30x | Sequencing | Read depth | 19,139 |
nssv3436802 | deletion | SAMN01920473 | Sequencing | Read depth | 13,799 |
nssv3436803 | deletion | SAMN01920474 | Sequencing | Read depth | 13,812 |
nssv3436804 | deletion | SAMN01920476 | Sequencing | Read depth | 13,908 |
nssv3436805 | deletion | SAMN01920492 | Sequencing | Read depth | 13,471 |
nssv3436806 | deletion | SAMN01920493 | Sequencing | Read depth | 13,471 |
nssv3436807 | deletion | SAMN01920494 | Sequencing | Read depth | 13,471 |
nssv3436808 | deletion | SAMN01920495 | Sequencing | Read depth | 13,471 |
nssv3436809 | deletion | SAMN01920496 | Sequencing | Read depth | 13,471 |
nssv3436810 | deletion | SAMN01920477 | Sequencing | Read depth | 13,641 |
nssv3436811 | deletion | SAMN01920479 | Sequencing | Read depth | 13,667 |
nssv3436812 | deletion | SAMN01920478 | Sequencing | Read depth | 13,652 |
nssv3436813 | deletion | SAMN01920480 | Sequencing | Read depth | 13,643 |
nssv3436814 | deletion | Gorilla_gorilla_gorilla-9753_Kokomo | Sequencing | Read depth | 13,644 |
nssv3436815 | deletion | SAMN01920483 | Sequencing | Read depth | 13,645 |
nssv3436816 | deletion | SAMN01920484 | Sequencing | Read depth | 13,628 |
nssv3436817 | deletion | SAMN01920485 | Sequencing | Read depth | 13,644 |
nssv3436818 | deletion | Gorilla_gorilla_gorilla-A935_Fritz | Sequencing | Read depth | 13,652 |
nssv3436819 | deletion | SAMN01920487 | Sequencing | Read depth | 13,625 |
nssv3436820 | deletion | SAMN01920489 | Sequencing | Read depth | 13,471 |
nssv3436821 | deletion | Gorilla_gorilla_gorilla-Snowflake | Sequencing | Read depth | 13,657 |
nssv3436822 | deletion | SAMN01920490 | Sequencing | Read depth | 13,471 |
nssv3436823 | deletion | SAMN01920491 | Sequencing | Read depth | 13,671 |
nssv3436824 | deletion | HGDP01307 | Sequencing | Read depth | 17,161 |
nssv3436825 | deletion | HGDP00521 | Sequencing | Read depth | 17,171 |
nssv3436826 | deletion | HGDP00778 | Sequencing | Read depth | 17,185 |
nssv3436827 | deletion | HGDP00998 | Sequencing | Read depth | 17,267 |
nssv3436828 | deletion | HGDP01284 | Sequencing | Read depth | 17,196 |
nssv3436829 | deletion | HGDP00456 | Sequencing | Read depth | 17,189 |
nssv3436830 | deletion | HGDP00542 | Sequencing | Read depth | 17,157 |
nssv3436831 | deletion | HGDP01029 | Sequencing | Read depth | 17,182 |
nssv3436832 | deletion | HGDP00665 | Sequencing | Read depth | 17,185 |
nssv3436833 | deletion | HGDP00927 | Sequencing | Read depth | 17,185 |
nssv3436834 | deletion | SAMN01920504 | Sequencing | Read depth | 14,831 |
nssv3436835 | deletion | SAMN01920506 | Sequencing | Read depth | 14,796 |
nssv3436836 | deletion | SAMN01920507 | Sequencing | Read depth | 14,643 |
nssv3436837 | deletion | SAMN01920508 | Sequencing | Read depth | 14,784 |
nssv3436838 | deletion | SAMN01920509 | Sequencing | Read depth | 14,796 |
nssv3436839 | deletion | Pan_paniscus-A920_Kidogo | Sequencing | Read depth | 14,643 |
nssv3436840 | deletion | SAMN01920510 | Sequencing | Read depth | 14,643 |
nssv3436841 | deletion | SAMN01920511 | Sequencing | Read depth | 14,796 |
nssv3436842 | deletion | SAMN01920513 | Sequencing | Read depth | 14,803 |
nssv3436843 | deletion | SAMN01920514 | Sequencing | Read depth | 14,790 |
nssv3436844 | deletion | SAMN01920515 | Sequencing | Read depth | 14,814 |
nssv3436845 | deletion | SAMN01920516 | Sequencing | Read depth | 14,643 |
nssv3436846 | deletion | Pan_paniscus-A951_Pongo | Sequencing | Read depth | 14,643 |
nssv3436847 | deletion | Pan_paniscus-X00095_Kakowet | Sequencing | Read depth | 14,858 |
nssv3436848 | deletion | SAMN01920517 | Sequencing | Read depth | 14,560 |
nssv3436849 | deletion | SAMN01920518 | Sequencing | Read depth | 14,544 |
nssv3436850 | deletion | SAMN01920519 | Sequencing | Read depth | 14,560 |
nssv3436851 | deletion | SAMN01920520 | Sequencing | Read depth | 14,560 |
nssv3436852 | deletion | SAMN01920521 | Sequencing | Read depth | 14,554 |
nssv3436853 | deletion | SAMN01920523 | Sequencing | Read depth | 14,551 |
nssv3436854 | deletion | SAMN01920524 | Sequencing | Read depth | 14,557 |
nssv3436855 | deletion | SAMN01920525 | Sequencing | Read depth | 14,553 |
nssv3436856 | deletion | SAMN01920526 | Sequencing | Read depth | 14,541 |
nssv3436857 | deletion | SAMN01920522 | Sequencing | Read depth | 14,557 |
nssv3436858 | deletion | SAMN01920527 | Sequencing | Read depth | 14,562 |
nssv3436859 | deletion | SAMN01920528 | Sequencing | Read depth | 14,776 |
nssv3436860 | deletion | SAMN01920531 | Sequencing | Read depth | 14,608 |
nssv3436861 | deletion | SAMN01920532 | Sequencing | Read depth | 14,576 |
nssv3436862 | deletion | Pan_troglodytes_schweinfurthii-Yolanda | Sequencing | Read depth | 14,664 |
nssv3436863 | deletion | SAMN01920529 | Sequencing | Read depth | 14,610 |
nssv3436864 | deletion | SAMN01920534 | Sequencing | Read depth | 14,815 |
nssv3436865 | deletion | SAMN01920536 | Sequencing | Read depth | 15,183 |
nssv3436866 | deletion | SAMN01920541 | Sequencing | Read depth | 14,615 |
nssv3436867 | deletion | Pan_troglodytes_verus-A907_Susie_A | Sequencing | Read depth | 14,602 |
nssv3436868 | deletion | SAMN01920537 | Sequencing | Read depth | 14,600 |
nssv3436869 | deletion | SAMN01920540 | Sequencing | Read depth | 14,584 |
nssv3436870 | deletion | SAMN01920539 | Sequencing | Read depth | 14,708 |
nssv3436871 | deletion | SAMN01920499 | Sequencing | Read depth | 13,641 |
nssv3436872 | deletion | SAMN01920502 | Sequencing | Read depth | 13,644 |
nssv3436873 | deletion | SAMN01920503 | Sequencing | Read depth | 13,626 |
nssv3436874 | deletion | SAMN01920497 | Sequencing | Read depth | 13,633 |
nssv3436875 | deletion | SAMN01920500 | Sequencing | Read depth | 13,643 |
nssv3436876 | deletion | SAMN01920501 | Sequencing | Read depth | 13,643 |
nssv3436877 | deletion | SAMN01920498 | Sequencing | Read depth | 13,636 |
nssv3436878 | deletion | Gorilla_gorilla_gorilla-Kwan | Sequencing | Read depth | 13,471 |
nssv3436879 | deletion | Gorilla_beringei_graueri-Mukisi | Sequencing | Read depth | 13,597 |
nssv3436880 | deletion | Gorilla_gorilla_gorilla-Kamilah | Sequencing | Read depth | 13,471 |
Variant Call Placement Information
Variant Call ID | Placement Type | Assembly | Chr | Start | Stop |
---|---|---|---|---|---|
nssv3436801 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436802 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436803 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436804 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436805 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436806 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436807 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436808 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436809 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436810 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436811 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436812 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436813 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436814 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436815 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436816 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436817 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436818 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436819 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436820 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436821 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436822 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436823 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436824 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436825 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436826 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436827 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436828 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436829 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436830 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436831 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436832 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436833 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436834 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436835 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436836 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436837 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436838 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436839 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436840 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436841 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436842 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436843 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436844 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436845 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436846 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436847 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436848 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436849 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436850 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436851 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436852 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436853 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436854 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436855 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436856 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436857 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436858 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436859 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436860 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436861 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436862 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436863 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436864 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436865 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436866 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436867 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436868 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436869 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436870 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436871 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436872 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436873 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436874 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436875 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436876 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436877 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436878 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436879 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |
nssv3436880 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,098,492 | 19,113,539 |