nsv997020
- Study:nstd82 (Sudmant et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:P_pygmaeus_2.0.2 (ponAbe2)
- Variant Calls:80
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,298
- Publication(s):Sudmant et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Variant Region Placement Information
Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|
nsv997020 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Primary Assembly | Chr1_rando m | 19,670,476 | 19,672,773 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv3437020 | deletion | Homo_denisova-Denisova_30x | Sequencing | Read depth | 19,139 |
nssv3437021 | deletion | SAMN01920473 | Sequencing | Read depth | 13,799 |
nssv3437022 | deletion | SAMN01920474 | Sequencing | Read depth | 13,812 |
nssv3437023 | deletion | SAMN01920476 | Sequencing | Read depth | 13,908 |
nssv3437024 | deletion | SAMN01920492 | Sequencing | Read depth | 13,471 |
nssv3437025 | deletion | SAMN01920493 | Sequencing | Read depth | 13,471 |
nssv3437026 | deletion | SAMN01920494 | Sequencing | Read depth | 13,471 |
nssv3437027 | deletion | SAMN01920495 | Sequencing | Read depth | 13,471 |
nssv3437028 | deletion | SAMN01920496 | Sequencing | Read depth | 13,471 |
nssv3437029 | deletion | SAMN01920477 | Sequencing | Read depth | 13,641 |
nssv3437030 | deletion | SAMN01920479 | Sequencing | Read depth | 13,667 |
nssv3437031 | deletion | SAMN01920478 | Sequencing | Read depth | 13,652 |
nssv3437032 | deletion | SAMN01920480 | Sequencing | Read depth | 13,643 |
nssv3437033 | deletion | Gorilla_gorilla_gorilla-9753_Kokomo | Sequencing | Read depth | 13,644 |
nssv3437034 | deletion | SAMN01920483 | Sequencing | Read depth | 13,645 |
nssv3437035 | deletion | SAMN01920484 | Sequencing | Read depth | 13,628 |
nssv3437036 | deletion | SAMN01920485 | Sequencing | Read depth | 13,644 |
nssv3437037 | deletion | Gorilla_gorilla_gorilla-A935_Fritz | Sequencing | Read depth | 13,652 |
nssv3437038 | deletion | SAMN01920487 | Sequencing | Read depth | 13,625 |
nssv3437039 | deletion | SAMN01920489 | Sequencing | Read depth | 13,471 |
nssv3437040 | deletion | Gorilla_gorilla_gorilla-Snowflake | Sequencing | Read depth | 13,657 |
nssv3437041 | deletion | SAMN01920490 | Sequencing | Read depth | 13,471 |
nssv3437042 | deletion | SAMN01920491 | Sequencing | Read depth | 13,671 |
nssv3437043 | deletion | HGDP01307 | Sequencing | Read depth | 17,161 |
nssv3437044 | deletion | HGDP00521 | Sequencing | Read depth | 17,171 |
nssv3437045 | deletion | HGDP00778 | Sequencing | Read depth | 17,185 |
nssv3437046 | deletion | HGDP00998 | Sequencing | Read depth | 17,267 |
nssv3437047 | deletion | HGDP01284 | Sequencing | Read depth | 17,196 |
nssv3437048 | deletion | HGDP00456 | Sequencing | Read depth | 17,189 |
nssv3437049 | deletion | HGDP00542 | Sequencing | Read depth | 17,157 |
nssv3437050 | deletion | HGDP01029 | Sequencing | Read depth | 17,182 |
nssv3437051 | deletion | HGDP00665 | Sequencing | Read depth | 17,185 |
nssv3437052 | deletion | HGDP00927 | Sequencing | Read depth | 17,185 |
nssv3437053 | deletion | SAMN01920504 | Sequencing | Read depth | 14,831 |
nssv3437054 | deletion | SAMN01920506 | Sequencing | Read depth | 14,796 |
nssv3437055 | deletion | SAMN01920507 | Sequencing | Read depth | 14,643 |
nssv3437056 | deletion | SAMN01920508 | Sequencing | Read depth | 14,784 |
nssv3437057 | deletion | SAMN01920509 | Sequencing | Read depth | 14,796 |
nssv3437058 | deletion | Pan_paniscus-A920_Kidogo | Sequencing | Read depth | 14,643 |
nssv3437059 | deletion | SAMN01920510 | Sequencing | Read depth | 14,643 |
nssv3437060 | deletion | SAMN01920511 | Sequencing | Read depth | 14,796 |
nssv3437061 | deletion | SAMN01920513 | Sequencing | Read depth | 14,803 |
nssv3437062 | deletion | SAMN01920514 | Sequencing | Read depth | 14,790 |
nssv3437063 | deletion | SAMN01920515 | Sequencing | Read depth | 14,814 |
nssv3437064 | deletion | SAMN01920516 | Sequencing | Read depth | 14,643 |
nssv3437065 | deletion | Pan_paniscus-A951_Pongo | Sequencing | Read depth | 14,643 |
nssv3437066 | deletion | Pan_paniscus-X00095_Kakowet | Sequencing | Read depth | 14,858 |
nssv3437067 | deletion | SAMN01920517 | Sequencing | Read depth | 14,560 |
nssv3437068 | deletion | SAMN01920518 | Sequencing | Read depth | 14,544 |
nssv3437069 | deletion | SAMN01920519 | Sequencing | Read depth | 14,560 |
nssv3437070 | deletion | SAMN01920520 | Sequencing | Read depth | 14,560 |
nssv3437071 | deletion | SAMN01920521 | Sequencing | Read depth | 14,554 |
nssv3437072 | deletion | SAMN01920523 | Sequencing | Read depth | 14,551 |
nssv3437073 | deletion | SAMN01920524 | Sequencing | Read depth | 14,557 |
nssv3437074 | deletion | SAMN01920525 | Sequencing | Read depth | 14,553 |
nssv3437075 | deletion | SAMN01920526 | Sequencing | Read depth | 14,541 |
nssv3437076 | deletion | SAMN01920522 | Sequencing | Read depth | 14,557 |
nssv3437077 | deletion | SAMN01920527 | Sequencing | Read depth | 14,562 |
nssv3437078 | deletion | SAMN01920528 | Sequencing | Read depth | 14,776 |
nssv3437079 | deletion | SAMN01920531 | Sequencing | Read depth | 14,608 |
nssv3437080 | deletion | SAMN01920532 | Sequencing | Read depth | 14,576 |
nssv3437081 | deletion | Pan_troglodytes_schweinfurthii-Yolanda | Sequencing | Read depth | 14,664 |
nssv3437082 | deletion | SAMN01920529 | Sequencing | Read depth | 14,610 |
nssv3437083 | deletion | SAMN01920534 | Sequencing | Read depth | 14,815 |
nssv3437084 | deletion | SAMN01920536 | Sequencing | Read depth | 15,183 |
nssv3437085 | deletion | SAMN01920541 | Sequencing | Read depth | 14,615 |
nssv3437086 | deletion | Pan_troglodytes_verus-A907_Susie_A | Sequencing | Read depth | 14,602 |
nssv3437087 | deletion | SAMN01920537 | Sequencing | Read depth | 14,600 |
nssv3437088 | deletion | SAMN01920540 | Sequencing | Read depth | 14,584 |
nssv3437089 | deletion | SAMN01920539 | Sequencing | Read depth | 14,708 |
nssv3437090 | deletion | SAMN01920499 | Sequencing | Read depth | 13,641 |
nssv3437091 | deletion | SAMN01920502 | Sequencing | Read depth | 13,644 |
nssv3437092 | deletion | SAMN01920503 | Sequencing | Read depth | 13,626 |
nssv3437093 | deletion | SAMN01920497 | Sequencing | Read depth | 13,633 |
nssv3437094 | deletion | SAMN01920500 | Sequencing | Read depth | 13,643 |
nssv3437095 | deletion | SAMN01920501 | Sequencing | Read depth | 13,643 |
nssv3437096 | deletion | SAMN01920498 | Sequencing | Read depth | 13,636 |
nssv3437097 | deletion | Gorilla_gorilla_gorilla-Kwan | Sequencing | Read depth | 13,471 |
nssv3437098 | deletion | Gorilla_beringei_graueri-Mukisi | Sequencing | Read depth | 13,597 |
nssv3437099 | deletion | Gorilla_gorilla_gorilla-Kamilah | Sequencing | Read depth | 13,471 |
Variant Call Placement Information
Variant Call ID | Placement Type | Assembly | Chr | Start | Stop |
---|---|---|---|---|---|
nssv3437020 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437021 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437022 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437023 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437024 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437025 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437026 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437027 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437028 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437029 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437030 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437031 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437032 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437033 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437034 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437035 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437036 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437037 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437038 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437039 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437040 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437041 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437042 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437043 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437044 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437045 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437046 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437047 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437048 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437049 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437050 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437051 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437052 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437053 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437054 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437055 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437056 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437057 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437058 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437059 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437060 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437061 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437062 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437063 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437064 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437065 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437066 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437067 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437068 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437069 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437070 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437071 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437072 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437073 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437074 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437075 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437076 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437077 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437078 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437079 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437080 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437081 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437082 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437083 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437084 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437085 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437086 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437087 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437088 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437089 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437090 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437091 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437092 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437093 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437094 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437095 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437096 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437097 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437098 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |
nssv3437099 | Submitted artifact | P_pygmaeus_2.0.2 (ponAbe2) | Chr1_rando m | 19,670,476 | 19,672,773 |