Search Summary
Search Criteria
Genotype Selection - Genes
100134444
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Search Results
Association Results | No data found. | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 7365 | Searched by gene symbols retrieved from gene search. |
eQTL Data | No data found | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | No data found. | Searched by traits retrieved from page 1 of association results. |
Genome View | Retrieving... |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | KCNJ18 | potassium inwardly rectifying channel subfamily J member 18 | 17 | : 21,692,523 - 21,704,612 | 613236 | |||||
| ||||||||||
Association Results
No association data found.
Modify Search
{
"section": "assoc",
"summary": "No data found.",
"mesh": [
],
"genes": [],
"snps": [],
"page": 1,
"call": "BuildGaP",
"pageSize": 50,
"recCount": 0
}
SNPs
# | rs# | Location | Function Class | Gene | Diversity | |
---|---|---|---|---|---|---|
1 | rs2142275549 | 17 | : 21,705,089 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
2 | rs2142275491 | 17 | : 21,705,027 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
3 | rs2142275475 | 17 | : 21,705,007 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | n/a |
4 | rs2142275463 | 17 | : 21,705,000 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
5 | rs2142275402 | 17 | : 21,704,952 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
6 | rs2142275343 | 17 | : 21,704,892 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
7 | rs2142275330 | 17 | : 21,704,866 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | n/a |
8 | rs2142275322 | 17 | : 21,704,856 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
9 | rs2142275313 | 17 | : 21,704,846 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
10 | rs2142275300 | 17 | : 21,704,829 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
11 | rs2142275269 | 17 | : 21,704,803 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
12 | rs2142275174 | 17 | : 21,704,710 | downstream_transcript_variant, 500B_downstream_variant | KCNJ18 | Yes |
13 | rs2142275015 | 17 | : 21,704,559 | 3_prime_UTR_variant | KCNJ18 | Yes |
14 | rs2142275002 | 17 | : 21,704,556 | 3_prime_UTR_variant | KCNJ18 | Yes |
15 | rs2142274939 | 17 | : 21,704,519 | 3_prime_UTR_variant | KCNJ18 | n/a |
16 | rs2142274873 | 17 | : 21,704,448 | 3_prime_UTR_variant | KCNJ18 | Yes |
17 | rs2142274850 | 17 | : 21,704,437 | 3_prime_UTR_variant | KCNJ18 | Yes |
18 | rs2142274772 | 17 | : 21,704,371 | 3_prime_UTR_variant | KCNJ18 | n/a |
19 | rs2142274767 | 17 | : 21,704,354 | 3_prime_UTR_variant | KCNJ18 | Yes |
20 | rs2142274696 | 17 | : 21,704,307 | 3_prime_UTR_variant | KCNJ18 | Yes |
21 | rs2142274692 | 17 | : 21,704,306 | 3_prime_UTR_variant | KCNJ18 | Yes |
22 | rs2142274686 | 17 | : 21,704,303 | 3_prime_UTR_variant | KCNJ18 | Yes |
23 | rs2142274651 | 17 | : 21,704,274 | 3_prime_UTR_variant | KCNJ18 | Yes |
24 | rs2142274609 | 17 | : 21,704,250 | 3_prime_UTR_variant | KCNJ18 | Yes |
25 | rs2142274565 | 17 | : 21,704,195 | 3_prime_UTR_variant | KCNJ18 | Yes |
26 | rs2142274546 | 17 | : 21,704,175 | 3_prime_UTR_variant | KCNJ18 | Yes |
27 | rs2142274493 | 17 | : 21,704,134 | 3_prime_UTR_variant | KCNJ18 | Yes |
28 | rs2142274482 | 17 | : 21,704,129 | 3_prime_UTR_variant | KCNJ18 | Yes |
29 | rs2142274432 | 17 | : 21,704,098 | 3_prime_UTR_variant | KCNJ18 | n/a |
30 | rs2142274104 | 17 | : 21,703,876 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
31 | rs2142274043 | 17 | : 21,703,844 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
32 | rs2142274036 | 17 | : 21,703,840 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
33 | rs2142274034 | 17 | : 21,703,837 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
34 | rs2142274000 | 17 | : 21,703,810 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
35 | rs2142273996 | 17 | : 21,703,808 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
36 | rs2142273933 | 17 | : 21,703,771 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
37 | rs2142273893 | 17 | : 21,703,741 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
38 | rs2142273875 | 17 | : 21,703,726 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
39 | rs2142273835 | 17 | : 21,703,693 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
40 | rs2142273823 | 17 | : 21,703,679 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
41 | rs2142273778 | 17 | : 21,703,631 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
42 | rs2142273756 | 17 | : 21,703,618 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
43 | rs2142273754 | 17 | : 21,703,616 | coding_sequence_variant, inframe_deletion | KCNJ18 | Yes |
44 | rs2142273674 | 17 | : 21,703,557 | coding_sequence_variant, synonymous_variant | KCNJ18 | Yes |
45 | rs2142273615 | 17 | : 21,703,516 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
46 | rs2142273600 | 17 | : 21,703,505 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
47 | rs2142273581 | 17 | : 21,703,489 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
48 | rs2142273510 | 17 | : 21,703,447 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
49 | rs2142273421 | 17 | : 21,703,401 | coding_sequence_variant, synonymous_variant | KCNJ18 | Yes |
50 | rs2142273411 | 17 | : 21,703,397 | missense_variant, coding_sequence_variant | KCNJ18 | Yes |
eQTL Data
No eQTL data found.
Modify Search{ "section": "eqtl", "summary": "No data found"}
dbGaP Studies
No dbGaP study data found.
Modify Search
{
"section": "GAP",
"summary": "No data found.",
"retstart": 0,
"pageSize": 50,
"count": ""
}