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Genotype Selection - Genes

11057
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Association Results 1 - 7 of 7 Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 44107 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 48 of 48 Searched by gene IDs retrieved from gene search.
dbGaP Studies  Retrieving... Searched by traits retrieved from association results.
Genome View  Retrieving... 
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Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
ABHD2abhydrolase domain containing 2, acylglycerol lipase 15 : 89,040,998 - 89,202,355612196
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["15", 89040998, 89202355] ], "markers": { "15": [ ["ABHD2", "NC_000015.10", 89040998, 89202355, "abhydrolase domain containing 2, acylglycerol lipase", "HS1-2, LABH2, PHPS1-2", 11057] ] }, "unmapped": [ ] } }

Get information.Genome View

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Summary
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

#
  Trait  
rs #
  Context  
  Gene  
  Location  
  P-value  
  Source  
  Study  
Population
  PubMed  
1 Coronary Artery Disease rs8042271 intergenic KRT18P47, ABHD2 15 : 89,030,987 4.000 x 10-8 NHGRI South Asian
East Asian
Asian
Arab
African
European
African American
Hispanic
26343387
2 Gastrointestinal Microbiome rs293377 intron ABHD2 15 : 89,091,183 5.000 x 10-8 NHGRI European 27723756
3 Blood Pressure rs189147436 missense ABHD2 15 : 89,188,218 8.007 x 10-7 dbGaP phs000930 African American
4 Arterial Pressure rs189147436 missense ABHD2 15 : 89,188,218 9.357 x 10-7 dbGaP phs000930 African American
5 Platelet Function Tests rs387727 intron ABHD2 15 : 89,097,624 7.140 x 10-6 dbGaP phs000375 African American
6 Platelet Function Tests rs12442502 intergenic KRT18P47, ABHD2 15 : 88,965,134 2.056 x 10-5 dbGaP phs000375 African American
7 Blood Pressure rs189147436 missense ABHD2 15 : 89,188,218 2.200 x 10-5 dbGaP phs000930 African American
{ "section": "assoc", "summary": "1 - 7 of 7", "mesh": [ "Arterial Pressure", "Blood Pressure", "Coronary Artery Disease", "Gastrointestinal Microbiome", "Platelet Function Tests" ], "genes": [11057, 390634], "snps": [293377, 387727, 8042271, 12442502, 189147436], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 7 }

Get information.SNPs

1 - 50 of 44107 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2150966255 15 : 89,202,838 500B_downstream_variant, downstream_transcript_variant ABHD2 Yes
2 rs2150966219 15 : 89,202,796 500B_downstream_variant, downstream_transcript_variant ABHD2 Yes
3 rs2150966083 15 : 89,202,698 500B_downstream_variant, downstream_transcript_variant ABHD2 n/a
4 rs2150966063 15 : 89,202,685 500B_downstream_variant, downstream_transcript_variant ABHD2 n/a
5 rs2150965989 15 : 89,202,635 500B_downstream_variant, downstream_transcript_variant ABHD2 Yes
6 rs2150965944 15 : 89,202,598 500B_downstream_variant, downstream_transcript_variant ABHD2 n/a
7 rs2150965776 15 : 89,202,417 500B_downstream_variant, downstream_transcript_variant ABHD2 Yes
8 rs2150965775 15 : 89,202,409 500B_downstream_variant, downstream_transcript_variant ABHD2 n/a
9 rs2150965771 15 : 89,202,406 500B_downstream_variant, downstream_transcript_variant ABHD2 n/a
10 rs2150965715 15 : 89,202,331 3_prime_UTR_variant ABHD2 n/a
11 rs2150965598 15 : 89,202,187 3_prime_UTR_variant ABHD2 n/a
12 rs2150965468 15 : 89,202,043 3_prime_UTR_variant ABHD2 n/a
13 rs2150965421 15 : 89,201,989 3_prime_UTR_variant ABHD2 n/a
14 rs2150965395 15 : 89,201,958 3_prime_UTR_variant ABHD2 Yes
15 rs2150965318 15 : 89,201,876 3_prime_UTR_variant ABHD2 Yes
16 rs2150965307 15 : 89,201,870 3_prime_UTR_variant ABHD2 n/a
17 rs2150965184 15 : 89,201,814 3_prime_UTR_variant ABHD2 n/a
18 rs2150965130 15 : 89,201,778 3_prime_UTR_variant ABHD2 n/a
19 rs2150965064 15 : 89,201,743 3_prime_UTR_variant ABHD2 n/a
20 rs2150965059 15 : 89,201,740 3_prime_UTR_variant ABHD2 n/a
21 rs2150964967 15 : 89,201,647 3_prime_UTR_variant ABHD2 n/a
22 rs2150964963 15 : 89,201,646 3_prime_UTR_variant ABHD2 n/a
23 rs2150964676 15 : 89,201,306 3_prime_UTR_variant ABHD2 n/a
24 rs2150964549 15 : 89,201,104 3_prime_UTR_variant ABHD2 Yes
25 rs2150964474 15 : 89,201,042 3_prime_UTR_variant ABHD2 n/a
26 rs2150964398 15 : 89,200,975 3_prime_UTR_variant ABHD2 n/a
27 rs2150964311 15 : 89,200,889 3_prime_UTR_variant ABHD2 n/a
28 rs2150964307 15 : 89,200,887 3_prime_UTR_variant ABHD2 Yes
29 rs2150963903 15 : 89,200,565 3_prime_UTR_variant ABHD2 n/a
30 rs2150963813 15 : 89,200,487 3_prime_UTR_variant ABHD2 n/a
31 rs2150963784 15 : 89,200,453 3_prime_UTR_variant ABHD2 Yes
32 rs2150963709 15 : 89,200,391 3_prime_UTR_variant ABHD2 n/a
33 rs2150963657 15 : 89,200,353 3_prime_UTR_variant ABHD2 Yes
34 rs2150963647 15 : 89,200,347 3_prime_UTR_variant ABHD2 n/a
35 rs2150963539 15 : 89,200,247 3_prime_UTR_variant ABHD2 Yes
36 rs2150963443 15 : 89,200,158 3_prime_UTR_variant ABHD2 Yes
37 rs2150963370 15 : 89,200,069 3_prime_UTR_variant ABHD2 n/a
38 rs2150963319 15 : 89,200,039 3_prime_UTR_variant ABHD2 Yes
39 rs2150963247 15 : 89,199,961 3_prime_UTR_variant ABHD2 n/a
40 rs2150963242 15 : 89,199,958 3_prime_UTR_variant ABHD2 n/a
41 rs2150963162 15 : 89,199,870 3_prime_UTR_variant ABHD2 Yes
42 rs2150963144 15 : 89,199,856 3_prime_UTR_variant ABHD2 Yes
43 rs2150963141 15 : 89,199,851 3_prime_UTR_variant ABHD2 Yes
44 rs2150963133 15 : 89,199,845 3_prime_UTR_variant ABHD2 Yes
45 rs2150963116 15 : 89,199,836 3_prime_UTR_variant ABHD2 n/a
46 rs2150963103 15 : 89,199,832 3_prime_UTR_variant ABHD2 Yes
47 rs2150962852 15 : 89,199,607 3_prime_UTR_variant ABHD2 Yes
48 rs2150962810 15 : 89,199,564 3_prime_UTR_variant ABHD2 Yes
49 rs2150962807 15 : 89,199,562 3_prime_UTR_variant ABHD2 Yes
50 rs2150962758 15 : 89,199,511 3_prime_UTR_variant ABHD2 Yes
{ "section": "SNP", "summary": "1 - 50 of 44107", "genes": [], "retstart": 0, "pageSize": 50, "count": 44107, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gaphttps.ncbi.nlm.nih.gov80gapphegenihttps://https.ncbi.nlm.nih.gov/gaphttps://https.ncbi.nlm.nih.govhttps://https.ncbi.nlm.nih.gov/gap/phegeni/gaphttps://https.ncbi.nlm.nih.gov/gap/phegeni/phegenitrueCE8BD9FC785AEC11_0332SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap15011057 CE8BD9FC785AEC11_0332SID1BgorK@CE8BD9FC785AEC11_0332SID
1 - 48 of 48 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
7Mapping the Genetic Architecture of Gene Expression in Human Liver101142718462017NAGSE9588
39Transcriptome genetics using second generation sequencing in a Caucasian population10116020220756HapMap3E-MTAB-197,
E-MTAB-198
40FHS_eQTL43018231791118562228122634phs000342phs000363
41FHS_eGene_leadQTLs122133562228122634phs000342phs000363
46GTEx_Adipose_Subcutaneous202237023715323phs000424.v6phs000424.v6
47GTEx_Adipose_Visceral_Omentum202223423715323phs000424.v6phs000424.v6
48GTEx_Adrenal_Gland303315923715323phs000424.v6phs000424.v6
49GTEx_Artery_Aorta303324723715323phs000424.v6phs000424.v6
50GTEx_Artery_Coronary606614123715323phs000424.v6phs000424.v6
51GTEx_Artery_Tibial303336023715323phs000424.v6phs000424.v6
52GTEx_Brain_Anterior_cingulate_cortex_BA2440449723715323phs000424.v6phs000424.v6
53GTEx_Brain_Caudate_basal_ganglia202213323715323phs000424.v6phs000424.v6
54GTEx_Brain_Cerebellar_Hemisphere202211423715323phs000424.v6phs000424.v6
55GTEx_Brain_Cerebellum303313823715323phs000424.v6phs000424.v6
56GTEx_Brain_Cortex202212723715323phs000424.v6phs000424.v6
57GTEx_Brain_Frontal_Cortex_BA9101111523715323phs000424.v6phs000424.v6
58GTEx_Brain_Hippocampus202210223715323phs000424.v6phs000424.v6
59GTEx_Brain_Hypothalamus404410323715323phs000424.v6phs000424.v6
60GTEx_Brain_Nucleus_accumbens_basal_ganglia303312423715323phs000424.v6phs000424.v6
61GTEx_Brain_Putamen_basal_ganglia505510323715323phs000424.v6phs000424.v6
62GTEx_Breast_Mammary_Tissue101121923715323phs000424.v6phs000424.v6
63GTEx_Cells_EBV-transformed_lymphocytes101113223715323phs000424.v6phs000424.v6
64GTEx_Cells_Transformed_fibroblasts202230523715323phs000424.v6phs000424.v6
65GTEx_Colon_Sigmoid202217323715323phs000424.v6phs000424.v6
66GTEx_Colon_Transverse303320723715323phs000424.v6phs000424.v6
67GTEx_Esophagus_Gastroesophageal_Junction303317523715323phs000424.v6phs000424.v6
68GTEx_Esophagus_Mucosa101132923715323phs000424.v6phs000424.v6
69GTEx_Esophagus_Muscularis202228123715323phs000424.v6phs000424.v6
70GTEx_Heart_Atrial_Appendage303321723715323phs000424.v6phs000424.v6
71GTEx_Heart_Left_Ventricle303324823715323phs000424.v6phs000424.v6
72GTEx_Liver404413823715323phs000424.v6phs000424.v6
73GTEx_Lung303333823715323phs000424.v6phs000424.v6
74GTEx_Muscle_Skeletal303345423715323phs000424.v6phs000424.v6
75GTEx_Nerve_Tibial202233323715323phs000424.v6phs000424.v6
76GTEx_Ovary202210923715323phs000424.v6phs000424.v6
77GTEx_Pancreas202219423715323phs000424.v6phs000424.v6
78GTEx_Pituitary101112423715323phs000424.v6phs000424.v6
79GTEx_Prostate404412023715323phs000424.v6phs000424.v6
80GTEx_Skin_Not_Sun_Exposed_Suprapubic202226923715323phs000424.v6phs000424.v6
81GTEx_Skin_Sun_Exposed_Lower_leg202238823715323phs000424.v6phs000424.v6
82GTEx_Small_Intestine_Terminal_Ileum202210523715323phs000424.v6phs000424.v6
83GTEx_Spleen202211923715323phs000424.v6phs000424.v6
84GTEx_Stomach101120223715323phs000424.v6phs000424.v6
85GTEx_Testis303319923715323phs000424.v6phs000424.v6
86GTEx_Thyroid303334723715323phs000424.v6phs000424.v6
87GTEx_Uterus30338923715323phs000424.v6phs000424.v6
88GTEx_Vagina20229823715323phs000424.v6phs000424.v6
89GTEx_Whole_Blood101143023715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 48 of 48"}
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