Search Summary
Search Criteria
Genotype Selection - Genes
124901707
Modify Search
Search Results
Association Results | No data found. | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 1234 | Searched by gene symbols retrieved from gene search. |
eQTL Data | No data found | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | No data found. | Searched by traits retrieved from page 1 of association results. |
Genome View | Retrieving... |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | LOC124901707 | uncharacterized LOC124901707 | 7 | : 99,411,945 - 99,412,295 | ||||||
| ||||||||||
Association Results
No association data found.
Modify Search
{
"section": "assoc",
"summary": "No data found.",
"mesh": [
],
"genes": [],
"snps": [],
"page": 1,
"call": "BuildGaP",
"pageSize": 50,
"recCount": 0
}
SNPs
# | rs# | Location | Function Class | Gene | Diversity | |
---|---|---|---|---|---|---|
1 | rs2150921513 | 7 | : 99,412,696 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
2 | rs2150921414 | 7 | : 99,412,652 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
3 | rs2150921411 | 7 | : 99,412,651 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
4 | rs2150921324 | 7 | : 99,412,618 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
5 | rs2150921178 | 7 | : 99,412,568 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
6 | rs2150921151 | 7 | : 99,412,548 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
7 | rs2150921069 | 7 | : 99,412,506 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
8 | rs2150921005 | 7 | : 99,412,466 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
9 | rs2150920963 | 7 | : 99,412,449 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
10 | rs2150920942 | 7 | : 99,412,433 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
11 | rs2150920912 | 7 | : 99,412,414 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
12 | rs2150920849 | 7 | : 99,412,371 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
13 | rs2150920762 | 7 | : 99,412,311 | downstream_transcript_variant, intron_variant, 500B_downstream_variant | BUD31, LOC124901707 | n/a |
14 | rs2150920621 | 7 | : 99,412,243 | non_coding_transcript_variant, intron_variant | BUD31, LOC124901707 | n/a |
15 | rs2150920185 | 7 | : 99,412,039 | intron_variant | BUD31, LOC124901707 | n/a |
16 | rs2150920155 | 7 | : 99,412,017 | intron_variant | BUD31, LOC124901707 | Yes |
17 | rs2150919638 | 7 | : 99,411,776 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
18 | rs2150919388 | 7 | : 99,411,687 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
19 | rs2150919325 | 7 | : 99,411,662 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
20 | rs2150918995 | 7 | : 99,411,515 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
21 | rs2150918683 | 7 | : 99,411,366 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
22 | rs2150918643 | 7 | : 99,411,344 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
23 | rs2150918323 | 7 | : 99,411,213 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
24 | rs2150918262 | 7 | : 99,411,190 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
25 | rs2150918249 | 7 | : 99,411,187 | splice_donor_variant, 2KB_upstream_variant, upstream_transcript_variant | BUD31, LOC124901707 | n/a |
26 | rs2150918190 | 7 | : 99,411,134 | coding_sequence_variant, upstream_transcript_variant, 2KB_upstream_variant, synonymous_variant | BUD31, LOC124901707 | n/a |
27 | rs2150917892 | 7 | : 99,411,030 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
28 | rs2150917849 | 7 | : 99,411,009 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
29 | rs2150917794 | 7 | : 99,410,983 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
30 | rs2150917637 | 7 | : 99,410,919 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
31 | rs2150917524 | 7 | : 99,410,868 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | Yes |
32 | rs2150917498 | 7 | : 99,410,840 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, LOC124901707 | n/a |
33 | rs2150916858 | 7 | : 99,410,596 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | n/a |
34 | rs2150916679 | 7 | : 99,410,543 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | n/a |
35 | rs2150916440 | 7 | : 99,410,448 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | n/a |
36 | rs2150916405 | 7 | : 99,410,436 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
37 | rs2150916253 | 7 | : 99,410,405 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
38 | rs2150916125 | 7 | : 99,410,400 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
39 | rs2150916106 | 7 | : 99,410,400 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
40 | rs2150916073 | 7 | : 99,410,399 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
41 | rs2150915986 | 7 | : 99,410,394 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | n/a |
42 | rs2150915877 | 7 | : 99,410,385 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
43 | rs2150915857 | 7 | : 99,410,381 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
44 | rs2150915746 | 7 | : 99,410,358 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | Yes |
45 | rs2150915019 | 7 | : 99,410,108 | upstream_transcript_variant, 2KB_upstream_variant, 5_prime_UTR_variant | BUD31, PDAP1, LOC124901707 | Yes |
46 | rs2150914714 | 7 | : 99,409,975 | upstream_transcript_variant, 2KB_upstream_variant, intron_variant | BUD31, PDAP1, LOC124901707 | n/a |
47 | rs1795241428 | 7 | : 99,412,790 | intron_variant, downstream_transcript_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
48 | rs1795240534 | 7 | : 99,412,776 | intron_variant, downstream_transcript_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
49 | rs1795240317 | 7 | : 99,412,771 | intron_variant, downstream_transcript_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
50 | rs1795239020 | 7 | : 99,412,749 | intron_variant, downstream_transcript_variant, 500B_downstream_variant | BUD31, LOC124901707 | Yes |
eQTL Data
No eQTL data found.
Modify Search{ "section": "eqtl", "summary": "No data found"}
dbGaP Studies
No dbGaP study data found.
Modify Search
{
"section": "GAP",
"summary": "No data found.",
"retstart": 0,
"pageSize": 50,
"count": ""
}