Search Summary
Search Criteria
Genotype Selection - Genes
22797
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Search Results
Association Results | 1 - 17 of 17 | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 84488 | Searched by gene symbols retrieved from gene search. |
eQTL Data | 1 - 46 of 46 | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | Retrieving... | Searched by traits retrieved from association results. |
Genome View | 1 gene over 1 chromosome. |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | TFEC | transcription factor EC | 7 | : 116,159,896 - 115,935,152 | 604732 | |||||
| ||||||||||
Association Results
SNPs
# | rs# | Location | Function Class | Gene | Diversity | |
---|---|---|---|---|---|---|
1 | rs2131086702 | 7 | : 116,090,324 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
2 | rs2131086692 | 7 | : 116,090,321 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
3 | rs2131086579 | 7 | : 116,090,279 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
4 | rs2131086396 | 7 | : 116,090,242 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
5 | rs2131086115 | 7 | : 116,090,159 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
6 | rs2131086023 | 7 | : 116,090,129 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
7 | rs2131085885 | 7 | : 116,090,097 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
8 | rs2131085655 | 7 | : 116,090,014 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
9 | rs2131085327 | 7 | : 116,089,919 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
10 | rs2131085068 | 7 | : 116,089,832 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
11 | rs2131084754 | 7 | : 116,089,769 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
12 | rs2131084062 | 7 | : 116,089,599 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
13 | rs2131083832 | 7 | : 116,089,508 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
14 | rs2131083798 | 7 | : 116,089,502 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
15 | rs2131083405 | 7 | : 116,089,398 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
16 | rs2131082993 | 7 | : 116,089,278 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
17 | rs2131082797 | 7 | : 116,089,209 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
18 | rs2131082163 | 7 | : 116,088,997 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
19 | rs2131080931 | 7 | : 116,088,632 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
20 | rs2131080883 | 7 | : 116,088,615 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
21 | rs2131080724 | 7 | : 116,088,578 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
22 | rs2131080548 | 7 | : 116,088,520 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
23 | rs2131080494 | 7 | : 116,088,508 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
24 | rs2131080075 | 7 | : 116,088,369 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
25 | rs2131079814 | 7 | : 116,088,294 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
26 | rs2131079734 | 7 | : 116,088,266 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
27 | rs2131079453 | 7 | : 116,088,228 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
28 | rs2131078954 | 7 | : 116,088,084 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
29 | rs2131078832 | 7 | : 116,088,046 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
30 | rs2131078775 | 7 | : 116,088,036 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
31 | rs2131078476 | 7 | : 116,087,957 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
32 | rs2131078459 | 7 | : 116,087,944 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
33 | rs2131078383 | 7 | : 116,087,914 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
34 | rs2131078364 | 7 | : 116,087,892 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
35 | rs2131078277 | 7 | : 116,087,851 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
36 | rs2131077854 | 7 | : 116,087,717 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
37 | rs2131077813 | 7 | : 116,087,698 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
38 | rs2131077730 | 7 | : 116,087,681 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
39 | rs2131077722 | 7 | : 116,087,680 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
40 | rs2131077699 | 7 | : 116,087,672 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
41 | rs2131077690 | 7 | : 116,087,672 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
42 | rs2131077679 | 7 | : 116,087,664 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
43 | rs2131077551 | 7 | : 116,087,609 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
44 | rs2131077400 | 7 | : 116,087,560 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
45 | rs2131077174 | 7 | : 116,087,486 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
46 | rs2131077161 | 7 | : 116,087,482 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
47 | rs2131077115 | 7 | : 116,087,477 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
48 | rs2131076574 | 7 | : 116,087,298 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
49 | rs2131076547 | 7 | : 116,087,285 | intron_variant, genic_upstream_transcript_variant | TFEC | n/a |
50 | rs2131076384 | 7 | : 116,087,237 | intron_variant, genic_upstream_transcript_variant | TFEC | Yes |
eQTL Data
1 - 46 of 46
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{ "section": "eqtl", "summary": "1 - 46 of 46"}